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Job DescriptionP00528
Confidence100.00%DateTue Jan 22 11:25:29 GMT 2013
Rank191Aligned Residues245
% Identity21%Templatec3dbqA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dual specificity protein kinase ttk; PDBTitle: crystal structure of ttk kinase domain
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   274.....280.........290.........300.........310.........320.. .......330..... ....340........
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Query Sequence  RDKYEIPRSEIQLLRKLGRGNFGEVFYGKWRNSIDVAVKTLREGTMSTA. . . AFLQEAAIMKKFR. . HNRLVALYAVCSQ
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Template Sequence  NECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT
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SSS
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TT

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   515....520.........530.........540.........550.........560.........570.........580.........590....
 
   349350.........360.........370.........380.........390.........400.........410.........420........
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Query Sequence  EEPIYIVQEYMSKGSLLDFLREGDGRYLHFEDLIYIATQVASGMEYLESKQLIHRDLAARNVLIGENNVAKICDFGLARV
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Template Sequence  DQYIYMVMECGN. IDLNSWLKKK. . KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV. DGMLKLIDFGIA. .
Template Known Secondary structure  SS


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GGG.TT


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   595....600...... ...610...... ...620.........630.........640.........650...... ...660........
 
   429430.........440.........450.........460.........470.........480.........490.........500........
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Query Sequence  IADDEYCPKQGSRFPVKWTAPEAIIYGKFSIKSDVWSYGILLMELFTYGQVPYPGMHSREVIENIERGFRMPKPTNHYFP
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Template Sequence  . . . . . . . . . NQMVGTVNYMPPEAIKDMSISPKSDVWSLGCILYYMTY. GKTPFQQIINQISKLHAIIDPNHEIEFPDIPE
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   669670.........680.........690.........700...... ...710.........720.........730........
 
   509510.........520.........530....
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Query Sequence  DNIYQLLLQCWDAVPEKRPTFEFLNH
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Template Sequence  KDLQDVLKCCLKRDPKQRISIPELLA
Template Known Secondary structure  T
SSTTTS

T
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   762.......770.........780.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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