Return to main results Retrieve Phyre Job Id

Job DescriptionP00528
Confidence100.00%DateTue Jan 22 11:25:29 GMT 2013
Rank235Aligned Residues220
% Identity26%Templatec3db8A_
PDB info PDB header:transferaseChain: A: PDB Molecule:polo-like kinase 1; PDBTitle: crystal structure of an activated (thr->asp) polo-like2 kinase 1 (plk1) catalytic domain in complex with compound3 041
Resolution3.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   282.......290.........300...... ...310.........320 .........330.........340.........350......
Predicted Secondary structure 








.





....






Query SS confidence 
























.













. . . .



































Query Sequence  SEIQLLRKLGRGNFGEVFYGKWRNS. IDVAVKTLREGTMS. . . . TAAFLQEAAIMKKFRHNRLVALYAVCSQEEPIYIVQ
Query Conservation    
 
   

 
 

 
  
     .  



 

     ....   

 
  

  
 




 
 
         

 
Alig confidence 
























.













....



































Template Conservation    
 
   

 
 

 
  
    

  



 
                

 

  
 
  
                 
Template Sequence  KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVL
Template Known Secondary structure 
TTTTT

TTTT
STT


TTB


SS
Template Predicted Secondary structure 






























Template SS confidence 















































































   37..40.........50.........60.........70.........80.........90.........100.........110......
 
   357..360.........370.........380.........390.........400.........410.........420.........430......
Predicted Secondary structure 










































Query SS confidence 















































































Query Sequence  EYMSKGSLLDFLREGDGRYLHFEDLIYIATQVASGMEYLESKQLIHRDLAARNVLIGENNVAKICDFGLARVIADDEYCP
Query Conservation 
    


   
       
          


 

 


   






  



      

 




          
Alig confidence 














..























































.......
Template Conservation                 ..                                    
        

 

      .......
Template Sequence  EICRRRSLLELHKRR. . KAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI. . . . . . .
Template Known Secondary structure 


TT
B..SS

TT




GGG
TT




TT

.......
Template Predicted Secondary structure 






..


























.......
Template SS confidence 















































































   117..120.........130. ........140.........150.........160.........170.........180.......
 
   437..440.........450.........460.........470.........480.........490.........500.........510......
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  KQGSRFPVKWTAPEAIIYGKFSIKSDVWSYGILLMELFTYGQVPYPGMHSREVIENIERGFRMPKPTNHYFPDNIYQLLL
Query Conservation         
 
 


 
     
 










 



 
  

      
    
  
 
   
     
  
  

 
Alig confidence  ....................


















.



















.






..









Template Conservation  ....................     





 

 

  .
  

           
   .       .. 
    


 
Template Sequence  . . . . . . . . . . . . . . . . . . . . HSFEVDIWSLGCILYTLLV. GKPPFETSCLKETYIRIKKN. EYSVPRH. . INPVASALIR
Template Known Secondary structure  ....................

T.SS
TT

SSTT.




TT..S
Template Predicted Secondary structure  ....................



.









.






..

Template SS confidence 















































































   214.....220.........230.. .......240.........250.. ....... 260.........
 
   517..520.........530....
Predicted Secondary structure 






Query SS confidence 

















Query Sequence  QCWDAVPEKRPTFEFLNH
Query Conservation   

  

  



  
  
Alig confidence 

















Template Conservation    
  

  
 
  


 
Template Sequence  RMLHADPTLRPSVAELLT
Template Known Secondary structure  T
SSGGGS

T
Template Predicted Secondary structure 







Template SS confidence 

















   270.........280.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions