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Job DescriptionP00528
Confidence100.00%DateTue Jan 22 11:25:29 GMT 2013
Rank36Aligned Residues251
% Identity24%Templatec3c4yA_
PDB info PDB header:transferaseChain: A: PDB Molecule:rhodopsin kinase; PDBTitle: crystal structure of apo form of g protein coupled receptor kinase 12 at 7.51a
Resolution7.51 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   277..280.........290.........300...... ...310...... ...320.........330.........340.........350.
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Query Sequence  YEIPRSEIQLLRKLGRGNFGEVFYGKWRNS. IDVAVKTLRE. . . . GTMSTAAFLQEAAIMKKFRHNRLVALYAVCSQEEP
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Template Sequence  QPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTD
Template Known Secondary structure  S


GGGB





SSSTTTTTTT
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   180.........190.........200.........210.........220.........230.........240.........250.........
 
   352.......360.........370 .........380.........390.........400.........410.........420.........
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Query Sequence  IYIVQEYMSKGSLLDFLRE. . GDGRYLHFEDLIYIATQVASGMEYLESKQLIHRDLAARNVLIGENNVAKICDFGLARVI
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Template Sequence  LCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL
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STTTSSSS
S

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   260.........270.........280.........290.........300.........310.........320.........330.........
 
   430.........440.........450.........460.........470.........480.... .....490.........500.......
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Query Sequence  ADDEYCPKQGSRFPVKWTAPEAIIYGKFSIKSDVWSYGILLMELFTYGQVPYPGM. . HSREVIENIERGFRMPKPTNHYF
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Template Sequence  KAGQTKTKG. YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIA. ARGPFRARGVENKELKQRVLEQ. AVTYPDK. . F
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   340........ .350.........360.........370.........380.... .....390.........400...... ...410... .
 
   508.510.........520...... ...530..
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Query Sequence  PDNIYQLLLQCWDAVPEKR. . . . . PTFEFL
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Template Sequence  SPASKDFCEALLQKDPEKRLGFRDGSCDGL
Template Known Secondary structure 
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SSSSSS

S
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   417..420.........430.........440......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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