Job Description P00528 Confidence 100.00% Date Tue Jan 22 11:25:29 GMT 2013 Rank 218 Aligned Residues 222 % Identity 26% Template c3a60B_ PDB info PDB header:transferase Chain: B: PDB Molecule:ribosomal protein s6 kinase beta-1; PDBTitle: crystal structure of unphosphorylated p70s6k1 (form i) Resolution 2.80 Å

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		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.					.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure																												.	.	.	.
Query SS confidence																												.	.	.	.
Query Sequence		E	I	P	R	S	E	I	Q	L	L	R	K	L	G	R	G	N	F	G	E	V	F	Y	G	K	W	.	.	.	.	R	N	S	I	D	V	A	V	K	T	L	R	E	G	T	M	S	T	A	A	F	L	Q	E	A	A	I	M	K	K	F	R	H	N	R	L	V	A	L	Y	A	V	C	S	Q	E	E	P	I	Y
Query Conservation																												.	.	.	.
Alig confidence																												.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	R	P	E	C	F	E	L	L	R	V	L	G	K	G	G	Y	G	K	V	F	Q	V	R	K	V	T	G	A	N	T	G	K	I	F	A	M	K	V	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	K	H	P	F	I	V	D	L	I	Y	A	F	Q	T	G	G	K	L	Y
Template Known Secondary structure					G	G	G											S	S	S									S	S	T	T	T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	B										S	S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.																			.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	Q	E	Y	M	S	K	G	S	L	L	D	F	L	R	E	G	D	G	R	Y	L	H	F	E	D	L	I	Y	I	A	T	Q	V	A	S	G	M	E	Y	L	E	S	K	Q	L	I	H	R	D	L	A	A	R	N	V	L	I	G	E	N	N	V	A	K	I	C	D	F	G	L	A	R	V	I	A	D	D	E
Query Conservation
Alig confidence																				.	.																																																								.	.	.	.	.
Template Conservation																				.	.																																																								.	.	.	.	.
Template Sequence		L	I	L	E	Y	L	S	G	G	E	L	F	M	Q	L	E	R	E	.	.	G	I	F	M	E	D	T	A	C	F	Y	L	A	E	I	S	M	A	L	G	H	L	H	Q	K	G	I	I	Y	R	D	L	K	P	E	N	I	M	L	N	H	Q	G	H	V	K	L	T	D	F	G	L	C	K	E	.	.	.	.	.
Template Known Secondary structure								T	T	T	T	S								.	.	T																								T	T				S				G	G	G					T	T					B				T	T				.	.	.	.	.
Template Predicted Secondary structure																				.	.																																																								.	.	.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.			.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		434	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	C	P	K	Q	G	S	R	F	P	V	K	W	T	A	P	E	A	I	I	Y	G	K	F	S	I	K	S	D	V	W	S	Y	G	I	L	L	M	E	L	F	T	Y	G	Q	V	P	Y	P	G	M	H	S	R	E	V	I	E	N	I	E	R	G	F	R	M	P	K	P	T	N	H	Y	F	P	D	N	I	Y	Q
Query Conservation
Alig confidence		.	.	.	.	.	.																																					.																					.								.	.
Template Conservation		.	.	.	.	.	.																																					.																					.								.	.
Template Sequence		.	.	.	.	.	.	S	C	G	T	I	E	Y	M	A	P	E	I	L	M	R	S	G	H	N	R	A	V	D	W	W	S	L	G	A	L	M	Y	D	M	L	T	.	G	A	P	P	F	T	G	E	N	R	K	K	T	I	D	K	I	L	K	C	.	K	L	N	L	P	P	Y	.	.	L	T	Q	E	A	R	D
Template Known Secondary structure		.	.	.	.	.	.						T	T	S						T	T	T	T	S	S	T																	.	S	S		T	T			S	S												.						S	S	.	.	S
Template Predicted Secondary structure		.	.	.	.	.	.																																					.																					.								.	.
Template SS confidence
								243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.			.	.	.	.	310	.	.
		514	.	.	.	.	.	520	.	.	.	.	.	.	.	.						.	530	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.
Query SS confidence																	.	.	.	.	.
Query Sequence		L	L	L	Q	C	W	D	A	V	P	E	K	R	P	T	.	.	.	.	.	F	E	F	L	N	H
Query Conservation																	.	.	.	.	.
Alig confidence																	.	.	.	.	.
Template Conservation
Template Sequence		L	L	K	K	L	L	K	R	N	A	A	S	R	L	G	A	G	P	G	D	A	G	E	V	Q	A
Template Known Secondary structure							S		S		T	T	T	S	T	T		S	T	T	T						T
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions