Return to main results Retrieve Phyre Job Id

Job DescriptionP00528
Confidence99.66%DateTue Jan 22 11:25:29 GMT 2013
Rank437Aligned Residues69
% Identity25%Templatec2yupA_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:vinexin; PDBTitle: solution structure of the second sh3 domain of human vinexin
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   85....90.........100.........110.........120.........130.........140.........150...
Predicted Secondary structure 















































Query SS confidence 




































































Query Sequence  RTTPTGVPGVVLKRVVVALYDYKSRDESDLSFMKGDRMEVIDDTESDWWRVVNLTTRQEGLIPLNFVAE
Query Conservation                 




 
      

 
 


   

      

       
  
 

 


  
Alig confidence 




































































Template Conservation      
            




      


   

 
 

      

       
  
 

  

  
Template Sequence  SSGKPPTYQVLEYGEAVAQYTFKGDLEVELSFRKGEHICLIRKVNENWYEGRITGTGRQGIFPASYVQV
Template Known Secondary structure 


S
S


GGGS
S




SSSB



TT
SS


SS
TTT

GGG
Template Predicted Secondary structure 





































Template SS confidence 




































































   5....10.........20.........30.........40.........50.........60.........70...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions