Return to main results Retrieve Phyre Job Id

Job DescriptionP00528
Confidence99.90%DateTue Jan 22 11:25:29 GMT 2013
Rank357Aligned Residues103
% Identity39%Templatec2yt6A_
PDB info PDB header:cell cycleChain: A: PDB Molecule:adult male urinary bladder cdna, riken full- PDBTitle: solution structure of the sh3_1 domain of yamaguchi sarcoma2 viral (v-yes) oncogene homolog 1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6970.........80.........90.........100.........110.........120.........130.........140........
Predicted Secondary structure 





















































Query SS confidence 















































































Query Sequence  GPLKIGGKGGVDIIRPRTTPTGVPGVVLKRVVVALYDYKSRDESDLSFMKGDRMEVIDDTESDWWRVVNLTTRQEGLIPL
Query Conservation                                 




 
      

 
 


   

      

       
  
 

 
Alig confidence 



























..

















































Template Conservation 



    
 
     
           ..   

 

 
    


   

 
 

      

       
  
 


Template Sequence  GSSGSSGASSSFSVVSSSYPTGLTGGVT. . IFVALYDYEARTTEDLSFKKGERFQIINNTEGDWWEARSIATGKSGYIPS
Template Known Secondary structure 



















SS

SS

..SS



SSTTS



TT

S
TT
SSS


T
Template Predicted Secondary structure 


























..






















Template SS confidence 















































































   1........10.........20........ .30.........40.........50.........60.........70........
 
   149150.........160.........170...
Predicted Secondary structure 



















Query SS confidence 
























Query Sequence  NFVAEERSVNSEDWFFENVLRKEAD
Query Conservation 


     

   



 


 


Alig confidence 
























Template Conservation   

          
      
  

Template Sequence  NYVVPADSIQAEEWYFGKMGRKDAE
Template Known Secondary structure  TTSSS
TTT


S



Template Predicted Secondary structure 














Template SS confidence 
























   7980.........90.........100...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions