Return to main results Retrieve Phyre Job Id

Job DescriptionP00528
Confidence100.00%DateTue Jan 22 11:25:29 GMT 2013
Rank143Aligned Residues250
% Identity27%Templatec2x7fA_
PDB info PDB header:transferaseChain: A: PDB Molecule:traf2 and nck-interacting protein kinase; PDBTitle: crystal structure of the kinase domain of human traf2- and2 nck-interacting kinase with wee1chk1 inhibitor
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   280.........290.........300...... ...310.........320.........330.... .....340.........350 ...
Predicted Secondary structure 








.






.





....
Query SS confidence 


























.



























.















. . . .


Query Sequence  PRSEIQLLRKLGRGNFGEVFYGKWRNS. IDVAVKTLREGTMSTAAFLQEAAIMKKF. RHNRLVALYAVCSQEE. . . . PIY
Query Conservation      
 
   

 
 

 
  
     .  



 

        

 
  

  
. 




 
 
      ....   
Alig confidence 


























.



























.















....


Template Conservation    
 
     

 
 

 
  
        



 
            
  

  
     
                  
Template Sequence  PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNGMDDQLW
Template Known Secondary structure 
TTTTTTTT



SSTT

STTB







Template Predicted Secondary structure 






























Template SS confidence 















































































   21........30.........40.........50.........60.........70.........80.........90.........100
 
   354.....360.........370.........380.........390.........400.........410.........420.........430...
Predicted Secondary structure 










































Query SS confidence 















































































Query Sequence  IVQEYMSKGSLLDFLREGDGRYLHFEDLIYIATQVASGMEYLESKQLIHRDLAARNVLIGENNVAKICDFGLARVIADDE
Query Conservation 

 
    


   
       
          


 

 


   






  



      

 




       
Alig confidence 








































































.......
Template Conservation 



    
 
                           
                                  .......
Template Sequence  LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVS. . . . . . .
Template Known Secondary structure 

TTSGGG


TT





SGGG
TT




TTT.......
Template Predicted Secondary structure 














































.......
Template SS confidence 















































































   103......110.........120.........130.........140.........150.........160.........170.....
 
   434.....440.........450.........460.........470.........480.........490.........500.........510...
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  YCPKQGSRFPVKWTAPEAIIYGKFSIKSDVWSYGILLMELFTYGQVPYPGMHSREVIENIERGFRMPKPTNHYFPDNIYQ
Query Conservation            
 
 


 
     
 










 



 
  

      
    
  
 
   
     
  
  
Alig confidence  .......












...


















.




























.






Template Conservation  .......        

   ...     





 






.
  

           
            . 
  
  
Template Sequence  . . . . . . . AGTPYWMAPEVIA. . . YDFKSDLWSLGITAIEMAE. GAPPLCDMHPMRALFLIPRNPAPRLKSKK. WSKKFQS
Template Known Secondary structure  .......


GGG


...

TT.SS
TTTTS
S




S
S
.S
Template Predicted Secondary structure  .......






...







.



















.

Template SS confidence 















































































   176...180........ .190.........200....... ..210.........220.........230...... ...240...
 
   514.....520.........530.........540.........550.
Predicted Secondary structure 













Query SS confidence 





































Query Sequence  LLLQCWDAVPEKRPTFEFLNHYFESFSVTSEVPYREVQ
Query Conservation 

  

  

  



  
   

         
 
  
Alig confidence 


















...















Template Conservation 

   
  

  
 
  

...
 

            
Template Sequence  FIESCLVKNHSQRPATEQL. . . MKHPFIRDQPNERQVR
Template Known Secondary structure 

SSGGGS

...TS

TT
Template Predicted Secondary structure 






...






Template SS confidence 





































   265....270.........280... ......290.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions