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Job DescriptionP00528
Confidence100.00%DateTue Jan 22 11:25:29 GMT 2013
Rank112Aligned Residues251
% Identity22%Templatec2vd5A_
PDB info PDB header:transferaseChain: A: PDB Molecule:dmpk protein; PDBTitle: structure of human myotonic dystrophy protein kinase in2 complex with the bisindoylmaleide inhibitor bim viii
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   278.280.........290.........300...... ...310.........320... ......330.........340.........350..
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Query Sequence  EIPRSEIQLLRKLGRGNFGEVFYGKWRNS. IDVAVKTLREGTMSTAA. . . . FLQEAAIMKKFRHNRLVALYAVCSQEEPI
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Template Sequence  RLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYL
Template Known Secondary structure  S

GGG
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   65....70.........80.........90.........100.........110.........120.........130.........140....
 
   353......360.........370.........380.........390.........400.........410.........420.........430..
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Query Sequence  YIVQEYMSKGSLLDFLREGDGRYLHFEDLIYIATQVASGMEYLESKQLIHRDLAARNVLIGENNVAKICDFGLARVIADD
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Template Sequence  YLVMEYYVGGDLLTLLSKF. GERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRAD
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   145....150.........160... ......170.........180.........190.........200.........210.........220...
 
   433......440.........450.. .......460.........470.........480.........490.........500.....
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Query Sequence  EYCPKQGSRFPVKWTAPEAI. . . . . . . IYGKFSIKSDVWSYGILLMELFTYGQVPYPGMHSREVIENIERGFRMPKPTNH
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Template Sequence  GTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFY. GQTPFYADSTAETYGKIVHYKEHLSLPG.
Template Known Secondary structure  S

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   224.....230.........240.........250.........260.........270... ......280.........290.........300.
 
   506...510.........520...... ...530...
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Query Sequence  YFPDNIYQLLLQCWDAVPEKR. . . PTFEFLN
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Template Sequence  . VPEEARDFIQRLLC. PPETRLGRGGAGDFR
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   306...310......... 320.........330....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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