Return to main results Retrieve Phyre Job Id

Job DescriptionP00528
Confidence99.63%DateTue Jan 22 11:25:29 GMT 2013
Rank478Aligned Residues63
% Identity24%Templatec2lcsA_
PDB info PDB header:transferase, signaling proteinChain: A: PDB Molecule:nap1-binding protein 2; PDBTitle: yeast nbp2p sh3 domain in complex with a peptide from ste20p
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   94.....100.........110.........120.........130.........140.........150......
Predicted Secondary structure 









































Query SS confidence 






























































Query Sequence  VVLKRVVVALYDYKSRDESDLSFMKGDRMEVIDDTESDWWRVVNLTTRQEGLIPLNFVAEERS
Query Conservation        




 
      

 
 


   

      

       
  
 

 


     
Alig confidence 






























































Template Conservation 
 
     

  
      


   

 
 

      

       
  
  
  

     
Template Sequence  AIVNQRAVALYDFEPENDNELRLAEGDIVFISYKHGQGWLVAENESGSKTGLVPEEFVSYIQP
Template Known Secondary structure 



SS
B

SSTTB

B
TT
TTT
TTSS
STT

S
Template Predicted Secondary structure 





























Template SS confidence 






























































  
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions