Job Description P00528 Confidence 100.00% Date Tue Jan 22 11:25:29 GMT 2013 Rank 10 Aligned Residues 330 % Identity 32% Template c2j0kB_ PDB info PDB header:transferase Chain: B: PDB Molecule:focal adhesion kinase 1; PDBTitle: crystal structure of a fragment of focal adhesion kinase2 containing the ferm and kinase domains. Resolution 3.0 Å

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		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.										.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.																	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.																	.	.	.	.	.	.	.	.	.
Query Sequence		S	L	S	V	K	D	W	E	D	G	R	G	Y	H	V	K	H	Y	R	I	K	P	L	D	N	G	G	Y	Y	I	A	T	N	.	Q	T	F	P	S	L	Q	A	L	V	M	A	Y	S	K	N	.	.	.	.	.	.	.	.	.	A	L	G	L	C	H	I	L	S	R	P	C	P	K	P	Q	P	Q	M	W	D
Query Conservation																																			.																	.	.	.	.	.	.	.	.	.
Alig confidence																																			.																	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	I	Q	Y	S	N	S	E	D	K	D	R	K	G	M	L	Q	L	K	I	A	G	A	P	E	P	L	T	V	T	A	P	S	L	T	I	A	E	N	M	A	D	L	I	D	G	Y	C	R	L	V	N	G	A	T	Q	S	F	I	I	R	P	G	V	R	S	H	T	D	D	Y	A	E	I	I	D	E	E	D	T
Template Known Secondary structure									S	S	S	S	S									S	S		S	S							S	S																			T	T			S			B						S															T
Template Predicted Secondary structure
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.					.	.	310	.	.	.	.	.	.	.	.	.	320	.			.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure																																									.	.	.	.															.	.
Query SS confidence																																									.	.	.	.															.	.
Query Sequence		L	G	P	E	L	R	D	K	Y	E	I	P	R	S	E	I	Q	L	L	R	K	L	G	R	G	N	F	G	E	V	F	Y	G	K	W	R	N	S	I	.	.	.	.	D	V	A	V	K	T	L	R	E	G	T	M	S	T	.	.	A	A	F	L	Q	E	A	A	I	M	K	K	F	R	H	N	R	L	V	A	L
Query Conservation																																									.	.	.	.															.	.
Alig confidence																																									.	.	.	.															.	.
Template Conservation
Template Sequence		Y	T	M	P	S	T	R	D	Y	E	I	Q	R	E	R	I	E	L	G	R	C	I	G	E	G	Q	F	G	D	V	H	Q	G	I	Y	M	S	P	E	N	P	A	M	A	V	A	I	K	T	C	K	N	C	T	S	D	S	V	R	E	K	F	L	Q	E	A	L	T	M	R	Q	F	D	H	P	H	I	V	K	L
Template Known Secondary structure		T	S					S	T	T	B			G	G	G											S	S											S	S	S											T	T	T	T	S															T	T				T	T	B
Template Predicted Secondary structure
Template SS confidence
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	V	C	S	Q	E	E	P	I	Y	I	V	Q	E	Y	M	S	K	G	S	L	L	D	F	L	R	E	G	D	G	R	Y	L	H	F	E	D	L	I	Y	I	A	T	Q	V	A	S	G	M	E	Y	L	E	S	K	Q	L	I	H	R	D	L	A	A	R	N	V	L	I	G	E	N	N	V	A	K	I	C	D
Query Conservation
Alig confidence							.																								.
Template Conservation							.																								.
Template Sequence		I	G	V	I	T	.	E	N	P	V	W	I	I	M	E	L	C	T	L	G	E	L	R	S	F	L	Q	V	R	.	K	F	S	L	D	L	A	S	L	I	L	Y	A	Y	Q	L	S	T	A	L	A	Y	L	E	S	K	R	F	V	H	R	D	I	A	A	R	N	V	L	V	S	A	T	D	C	V	K	L	G	D
Template Known Secondary structure							.	S	S	S									T	T		B								T	.	T	T	T																						T	T	T				S			S	G	G	G						T	T
Template Predicted Secondary structure							.																								.
Template SS confidence
		487	.	.	490	.		.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.		.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.
		423	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	L	A	R	V	I	A	D	D	E	Y	C	P	K	Q	G	S	R	F	P	V	K	W	T	A	P	E	A	I	I	Y	G	K	F	S	I	K	S	D	V	W	S	Y	G	I	L	L	M	E	L	F	T	Y	G	Q	V	P	Y	P	G	M	H	S	R	E	V	I	E	N	I	E	R	G	F	R	M	P	K	P
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	G	L	S	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	I	K	W	M	A	P	E	S	I	N	F	R	R	F	T	S	A	S	D	V	W	M	F	G	V	C	M	W	E	I	L	M	H	G	V	K	P	F	Q	G	V	K	N	N	D	V	I	G	R	I	E	N	G	E	R	L	P	M	P
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.			G	G	G																													T	T	S			T	T	T	T												T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		565	.	.	.	.															570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
		503	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	H	Y	F	P	D	N	I	Y	Q	L	L	L	Q	C	W	D	A	V	P	E	K	R	P	T	F	E	F	L	N	H	Y	F	E	S	F	S	V	T	S	E	V	P
Query Conservation
Alig confidence				.	.
Template Conservation				.	.
Template Sequence		P	N	.	.	C	P	P	T	L	Y	S	L	M	T	K	C	W	A	Y	D	P	S	R	R	P	R	F	T	E	L	K	A	Q	L	S	T	I	L	E	E	E	K	L	Q
Template Known Secondary structure		T	T	.	.												T	T		S	S	G	G	G	S																			T
Template Predicted Secondary structure				.	.
Template SS confidence
		645	.			.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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