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Job DescriptionP00528
Confidence100.00%DateTue Jan 22 11:25:29 GMT 2013
Rank257Aligned Residues205
% Identity31%Templatec2hakH_
PDB info PDB header:signaling protein,transferaseChain: H: PDB Molecule:serine/threonine-protein kinase mark1; PDBTitle: catalytic and ubiqutin-associated domains of mark1/par-1
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   282.......290.........300...... ...310.........320. ........330.........340.........350.......
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Query Sequence  SEIQLLRKLGRGNFGEVFYGKWRNS. IDVAVKTLREGTMST. . . AAFLQEAAIMKKFRHNRLVALYAVCSQEEPIYIVQE
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Template Sequence  GNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVME
Template Known Secondary structure  TT
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   51........60.........70.........80.........90.........100.........110.........120.........130
 
   358.360.........370.........380.........390.........400.........410.........420.........430.......
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Query Sequence  YMSKGSLLDFLREGDGRYLHFEDLIYIATQVASGMEYLESKQLIHRDLAARNVLIGENNVAKICDFGLARVIADDEYCPK
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Template Sequence  YASGGEVFDYLVAH. . GRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSN. . . . . . . . . .
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   131........140.... .....150.........160.........170.........180.........190........
 
   438.440.........450.........460.........470.........480.........490.........500.........510.......
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Query Sequence  QGSRFPVKWTAPEAIIYGKFSIKSDVWSYGILLMELFTYGQVPYPGMHSREVIENIERGFRMPKPTNHYFPDNIYQLLLQ
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Template Sequence  . . . . . . . . . . . . . . . . EFTVGPEVDVWSLGVILYTLVS. GSLPFDR. . . . . . . . . . . . . . . . . . . IPFYMSTDCENLLKK
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   199200.........210.........220 ....... ..230.........240..
 
   518.520.........530....
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Query Sequence  CWDAVPEKRPTFEFLNH
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Template Sequence  LLVLNPIKRGSLEQIMK
Template Known Secondary structure  T
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   284.....290.........300
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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