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Job DescriptionP00528
Confidence100.00%DateTue Jan 22 11:25:29 GMT 2013
Rank76Aligned Residues249
% Identity27%Templatec2clqA_
PDB info PDB header:transferaseChain: A: PDB Molecule:mitogen-activated protein kinase kinase kinase 5; PDBTitle: structure of mitogen-activated protein kinase kinase kinase2 5
Resolution2.3 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   276...280.........290.........300...... ...310.........320.........330.........340.........350....
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Query Sequence  KYEIPRSEIQLLRKLGRGNFGEVFYGKWRNS. IDVAVKTLREGTMSTAAFLQEAAIMKKFRHNRLVALYAVCSQEEPIYI
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Template Sequence  EYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS. . QPLHEEIALHKHLKHKNIVQYLGSFSENGFIKI
Template Known Secondary structure 

B
TTSSB

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..T


TTB

TT
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   672.......680.........690.........700.........710...... ...720.........730.........740.........
 
   355....360.........370.... .....380.........390.........400.........410.. .......420.........430..
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Query Sequence  VQEYMSKGSLLDFLREGDGR. YLHFEDLIYIATQVASGMEYLESKQLIHRDLAARNVLI. GENNVAKICDFGLARVIADD
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Template Sequence  FMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG.
Template Known Secondary structure 

STT


TT
TT



SGGGTTT



TTT
S

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   753......760.........770.........780.........790.........800.........810.........820.........830.
 
   433......440.........450...... ...460.........470.........480.........490.........500.........510
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Query Sequence  EYCPKQGSRFPVKWTAPEAIIYGK. . FSIKSDVWSYGILLMELFTYGQVPYPGMHSREVIENIERGFRMPKPTNHYFPDN
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Template Sequence  . . . . . ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMAT. GKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAE
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GGG

GGGG
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   837..840.........850.........860.........870...... ...880.........890.........900.........910
 
   511........520.........530...
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Query Sequence  IYQLLLQCWDAVPEKRPTFEFLN
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Template Sequence  AKAFILKCFEPDPDKRACANDLL
Template Known Secondary structure  TT
SSTTTS

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   911........920.........930...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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