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Job DescriptionP00528
Confidence100.00%DateTue Jan 22 11:25:29 GMT 2013
Rank103Aligned Residues248
% Identity23%Templatec2bdwB_
PDB info PDB header:transferaseChain: B: PDB Molecule:hypothetical protein k11e8.1d; PDBTitle: crystal structure of the auto-inhibited kinase domain of2 calcium/calmodulin activated kinase ii
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   282.......290.........300...... ...310.........320.. .......330.........340.........350.......
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Query Sequence  SEIQLLRKLGRGNFGEVFYGKWRNS. IDVAVKTLREGTMSTA. . . AFLQEAAIMKKFRHNRLVALYAVCSQEEPIYIVQE
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Template Sequence  DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD
Template Known Secondary structure  TTTTTTT


SS




TTB


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   11........20.........30.........40.........50.........60.........70.........80.........90
 
   358.360.........370.........380.........390.........400.........410... ......420.........430....
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Query Sequence  YMSKGSLLDFLREGDGRYLHFEDLIYIATQVASGMEYLESKQLIHRDLAARNVLIG. . . ENNVAKICDFGLARVIADDEY
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Template Sequence  LVTGGELFEDI. . VAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS. .
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S
B..TT
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   91........100. ........110.........120.........130.........140.........150.........160......
 
   435....440.........450.........460.........470.........480.........490....... ..500.........510...
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Query Sequence  CPKQGSRFPVKWTAPEAIIYGKFSIKSDVWSYGILLMELFTYGQVPYPGMHSREVIENIERGF. RMPKPTNHYFPDNIYQ
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Template Sequence  EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV. GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKS
Template Known Secondary structure 
B


S
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B
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   168.170.........180.........190.........200........ .210.........220.........230.........240......
 
   514.....520.........530....
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Query Sequence  LLLQCWDAVPEKRPTFEFLNH
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Template Sequence  LIDSMLTVNPKKRITADQALK
Template Known Secondary structure  S
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   247..250.........260.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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