 |
| Job Description | P00528 | | Confidence | 99.91% | Date | Tue Jan 22 11:25:29 GMT 2013 |
| Rank | 345 | Aligned Residues | 99 |
| % Identity | 32% | Template | c2augB_ |
| PDB info |
PDB header:signaling protein | Chain: B: PDB Molecule:growth factor receptor-bound protein 14; |
PDBTitle: crystal structure of the grb14 sh2 domain
|
| Resolution | 2.30 Å |
|
 |
|   |   |
158 | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | |
|
|
|
230 | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
| . | . | . | . |
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
| Query Sequence |   |
N | S | E | D | W | F | F | E | N | V | L | R | K | E | A | D | K | L | L | L | A | E | E | N | P | R | G | T | F | L | V | R | P | S | E | H | N | P | N | G | Y | S | L | S | V | K | D | W | E | D | G | R | G | Y | H | V | K | H | Y | R | I | K | P | L | D | N | G | G | Y | Y | I | A | . |
. |
. |
. |
T | N | Q | T |
| Query Conservation |   |
|   |   |   |
|
|
|
|   |
|
|
|   |
|
|
|   |
|
|   |   |   |   |   |   |   |
|   |
|
|
|
|   |
|
|   |   |   |
|   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |   |   |   |   |
|   |
|   |
|   | . | . | . | . |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
| Template Conservation |   |
  |   |
|   |
|
|   |
|   |
|
|
|   |   |
|
|   |
|
|   |   |   |
|   |   |   |
|   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |
|
|
|   |   | . | . | . | . | . |   |   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| Template Sequence |   |
R | S | Q | P | W | F | H | H | K | I | S | R | D | E | A | Q | R | L | I | I | Q | Q | G | L | V | D | G | V | F | L | V | R | D | S | Q | S | N | P | K | T | F | V | L | S | M | S | H | . |
. |
. |
. |
. |
G | Q | K | I | K | H | F | Q | I | I | P | V | E | D | D | G | E | M | F | H | T | L | D | D | G | H | T | R |
| Template Known Secondary structure |   |
G | G | S | T | T |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |
| S |
| T | T |  |  |  |  |  |  |
| S | S | S | S |
|
|  |  |  |  |  |  |  | . | . | . | . | . | T | T |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  | S | S | T | T | S | S |
|
| Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
435 | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . |
|   |
|   |   |
234 | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . |
| Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
F | P | S | L | Q | A | L | V | M | A | Y | S | K | N | A | L | G | L | C | H | I | L | S | R | P | C | P | K |
| Query Conservation |   |
|   |
|
|   |
|
|
|   |   |
|   |   |   |   |
|
|
|   |   |   |
|   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |
|
| Template Sequence |   |
F | T | D | L | I | Q | L | V | E | F | Y | Q | L | N | K | G | V | L | P | C | K | L | K | H | Y | C | A | R |
| Template Known Secondary structure |   |
B | S | S |  |  |  |  |  |  |  |  |  |  |
|
| T | T | S | S | S |
|
|
|  |  |
|
|
|
| Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|