Return to main results Retrieve Phyre Job Id

Job DescriptionP00528
Confidence100.00%DateTue Jan 22 11:25:29 GMT 2013
Rank147Aligned Residues248
% Identity21%Templatec1zrzA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase c, iota; PDBTitle: crystal structure of the catalytic domain of atypical2 protein kinase c-iota
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   279280.........290.........300...... ...310..... ....320.........330... ......340.........350..
Predicted Secondary structure 








.
....




.






Query SS confidence 



























.








. . . .

















.


















Query Sequence  IPRSEIQLLRKLGRGNFGEVFYGKWRNS. IDVAVKTLR. . . . EGTMSTAAFLQEAAIMKK. FRHNRLVALYAVCSQEEPI
Query Conservation 
    
 
   

 
 

 
  
     .  



 

....        

 
  

  .
 




 
 
        
Alig confidence 



























.








....

















.


















Template Conservation 
 
  
     

 
 

 

 
    
   



 
                
   
     
  
             
Template Sequence  LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRL
Template Known Secondary structure 

STT
SSTTT

GGG

STTTTTTTSSTTB


B
SS
Template Predicted Secondary structure 


























Template SS confidence 















































































   240.........250.........260.........270.........280.........290.........300.........310.........
 
   353......360.........370.........380.........390.........400.........410.........420.........430..
Predicted Secondary structure 









































Query SS confidence 















































































Query Sequence  YIVQEYMSKGSLLDFLREGDGRYLHFEDLIYIATQVASGMEYLESKQLIHRDLAARNVLIGENNVAKICDFGLARVIADD
Query Conservation   

 
    


   
       
          


 

 


   






  



      

 




      
Alig confidence 


















..


























































Template Conservation    
        
       ..              
           
 
      

         
 
 
 
      
Template Sequence  FFVIEYVNGGDLMFHMQRQ. . RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP
Template Known Secondary structure 


S
BTT..SS

TT
B




GGG
TTS



TT
B



T
Template Predicted Secondary structure 











..




































Template SS confidence 















































































   320.........330........ .340.........350.........360.........370.........380.........390.......
 
   433......440.........450.........460.........470.........480.........490.........500.........510..
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  EYCPKQGSRFPVKWTAPEAIIYGKFSIKSDVWSYGILLMELFTYGQVPYPGMHSREVIENIERGFRMPKPTNHYFPDNIY
Query Conservation             
 
 


 
     
 










 



 
  

      
    
  
 
   
     
  
 
Alig confidence 




..



































.



















.






..





Template Conservation       ..                      






 



 
.
  

           
   .       .. 
    
Template Sequence  GDTTS. . FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA. GRSPFDQNTEDYLFQVILEK. QIRIPRS. . MSVKAA
Template Known Secondary structure  T

B
..

S
GGG

TT

B
T.SS
S




.




TT..S
Template Predicted Secondary structure 




..

























.









.






..

Template SS confidence 















































































   398.400.. .......410.........420.........430........ .440.........450........ .460..... ....470.
 
   513......520........ .530....
Predicted Secondary structure 






......
Query SS confidence 















. . . . . .





Query Sequence  QLLLQCWDAVPEKRPT. . . . . . FEFLNH
Query Conservation   

  

  

  


......
  
  
Alig confidence 















......





Template Conservation 


  

  

  



       


 
Template Sequence  SVLKSFLNKDPKERLGCLPQTGFADIQG
Template Known Secondary structure  T
SSSTTSTTTSTTT
Template Predicted Secondary structure 













Template SS confidence 



























   482.......490.........500.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions