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Job DescriptionP00528
Confidence100.00%DateTue Jan 22 11:25:29 GMT 2013
Rank39Aligned Residues245
% Identity20%Templatec1ym7C_
PDB info PDB header:transferaseChain: C: PDB Molecule:beta-adrenergic receptor kinase 1; PDBTitle: g protein-coupled receptor kinase 2 (grk2)
Resolution4.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  SEIQLLRKLGRGNFGEVFYGKWRN. SIDVAVKTLREGTMSTA. . . . . . . AFLQEAAIMKKFRHNRLVALYAVCSQEEPIY
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Template Sequence  NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS
Template Known Secondary structure  GG
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   354.....360.........370.........380.........390.........400.........410.........420.........430...
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Query Sequence  IVQEYMSKGSLLDFLREGDGRYLHFEDLIYIATQVASGMEYLESKQLIHRDLAARNVLIGENNVAKICDFGLARVIADDE
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Template Sequence  FILDLMNGGDLHYHLSQH. . GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK
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   269270.........280...... ...290.........300.........310.........320.........330.........340......
 
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Query Sequence  YCPKQGSRFPVKWTAPEAIIYGK. FSIKSDVWSYGILLMELFTYGQVPYPG. . MHSREVIENIERGFRMPKPTNHYFPDN
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Template Sequence  PHASVGTHG. . . YMAPEVLQKGVAYDSSADWFSLGCMLFKLLR. GHSPFRQHKTKDKHEIDRMTLTMAVELPDS. . FSPE
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   347..350..... ....360.........370.........380...... ...390.........400.........410...... ...420
 
   511........520....... ..530....
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Query Sequence  IYQLLLQCWDAVPEKRP. . . . . TFEFLNH
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Template Sequence  LRSLLEGLLQRDVNRRLGCLGRGAQEVKE
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   421........430.........440.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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