Return to main results Retrieve Phyre Job Id

Job DescriptionP00528
Confidence100.00%DateTue Jan 22 11:25:29 GMT 2013
Rank125Aligned Residues248
% Identity21%Templatec1kobB_
PDB info PDB header:kinaseChain: B: PDB Molecule:twitchin; PDBTitle: twitchin kinase fragment (aplysia), autoregulated protein2 kinase domain
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   282.......290.........300..... ....310........ .320.........330.........340.........350.........
Predicted Secondary structure 







.




.










Query SS confidence 























.












.








































Query Sequence  SEIQLLRKLGRGNFGEVFYGKWRN. SIDVAVKTLREGT. MSTAAFLQEAAIMKKFRHNRLVALYAVCSQEEPIYIVQEYM
Query Conservation    
 
   

 
 

 
  
    .   



 

   .     

 
  

  
 




 
 
         

 
  
Alig confidence 























.












.








































Template Conservation    
     

 
 

 

 
        



 
             

  
  
 




             

 
  
Template Sequence  DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL
Template Known Secondary structure  GTTTTTT



STT

STTB


SS

Template Predicted Secondary structure 






























Template SS confidence 















































































   51........60.........70.........80.........90.........100.........110.........120.........130
 
   360.........370.........380.........390.........400.........410... ......420.........430.......
Predicted Secondary structure 
























..















Query SS confidence 





















































. .























Query Sequence  SKGSLLDFLREGDGRYLHFEDLIYIATQVASGMEYLESKQLIHRDLAARNVLIG. . ENNVAKICDFGLARVIADDEYCPK
Query Conservation    


   
       
          


 

 


   






  



 ..     

 




           
Alig confidence 











.








































..























Template Conservation    
 
       .                                                   
 
 
           
Template Sequence  SGGELFDRIAAE. DYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKV
Template Known Secondary structure 


BTT
T.T



TTT




GGGSSTT
S



TT


TTS
Template Predicted Secondary structure 











.












































Template SS confidence 















































































   131........140.. .......150.........160.........170.........180.........190.........200.........
 
   438.440.........450.........460.........470.........480.........490...... ...500.........510......
Predicted Secondary structure 























.











Query SS confidence 


























































.



















Query Sequence  QGSRFPVKWTAPEAIIYGKFSIKSDVWSYGILLMELFTYGQVPYPGMHSREVIENIERG. FRMPKPTNHYFPDNIYQLLL
Query Conservation        
 
 


 
     
 










 



 
  

      
    
  
. 
   
     
  
  

 
Alig confidence 



..































.



















.



















Template Conservation      ..                  





 






.
  

           
               
     

 
Template Sequence  TTAT. . AEFAAPEIVDREPVGFYTDMWAIGVLGYVLLS. GLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIK
Template Known Secondary structure 
TT..GGG

TT

B
.S

TT

SST




TTTTTTS
Template Predicted Secondary structure 



..




















.



















Template SS confidence 















































































   210... ......220.........230.........240..... ....250.........260.........270.........280......
 
   517..520.........530...
Predicted Secondary structure 






Query SS confidence 
















Query Sequence  QCWDAVPEKRPTFEFLN
Query Conservation   

  

  



  
 
Alig confidence 
















Template Conservation    
  

  
 
  


Template Sequence  NLLQKEPRKRLTVHDAL
Template Known Secondary structure  TTS
SSGGGS

T
Template Predicted Secondary structure 






Template SS confidence 
















   287..290.........300...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions