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Job DescriptionP00528
Confidence100.00%DateTue Jan 22 11:25:29 GMT 2013
Rank6Aligned Residues429
% Identity38%Templatec1k9aB_
PDB info PDB header:transferaseChain: B: PDB Molecule:carboxyl-terminal src kinase; PDBTitle: crystal structure analysis of full-length carboxyl-terminal2 src kinase at 2.5 a resolution
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   92.......100.........110.........120.........130.........140.........150...... ...160.....
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Query Sequence  PGVVLKRVVVALYDYKSRDESDLSFMKGDRMEVIDDTESDWWRVVNLTTRQEGLIPLNFVAEERS. . . . . . VNSEDWFFE
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Template Sequence  ASWPSGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKREGVKAGTKLSLMPWFHG
Template Known Secondary structure  S


TT
SS
B

SSTTB

B
TT

SSTT
TTS
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TTB

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   6...10.........20.........30.........40.........50.........60.........70.........80.....
 
   166...170.........180.........190.........200.........210.........220.........230.........240.....
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Query Sequence  NVLRKEADKLLLAEENPRGTFLVRPSEHNPNGYSLSVKDWEDGRGYHVKHYRIKPLDNGGYYIATNQTFPSLQALVMAYS
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Template Sequence  KITREQAERLLY. . PPETGLFLVRESTNYPGDYTLCVSC. . . . . EGKVEHYRIMY. HASKLSIDEEVYFENLMQLVEHYT
Template Known Secondary structure  S

T
..S

TT

SSSTT
.....TT.TTSSSSS
BSS
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   86...90....... ..100.........110.........120.. .......130... ......140.........150.......
 
   246...250.........260.........270.........280.........290.........300.........310.........320.....
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Query Sequence  KNALGLCHILSRPCPKPQPQMWDLGPELRDKYEIPRSEIQLLRKLGRGNFGEVFYGKWRNSIDVAVKTLREGTMSTAAFL
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Template Sequence  TDADGLCTRLIKPKVMEGTVAAQDE. FYRSGWALNMKELKLLQTIGKGEFGDVMLGDYRG. NKVAVKCIKND. ATAQAFL
Template Known Secondary structure 

TTSSS


SB


SS
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B

GGG

TTTT.SS
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   158.160.........170.........180.. .......190.........200.........210...... ...220....... ..230....
 
   326...330.........340.........350 .........360.........370.........380.........390.........400....
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Query Sequence  QEAAIMKKFRHNRLVALYAVCSQEE. PIYIVQEYMSKGSLLDFLREGDGRYLHFEDLIYIATQVASGMEYLESKQLIHRD
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Template Sequence  AEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRD
Template Known Secondary structure  TT


TTB


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TT
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   235....240.........250.........260.........270.........280.........290.........300.........310....
 
   405....410.........420.........430.........440.........450.........460.........470.........480....
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Query Sequence  LAARNVLIGENNVAKICDFGLARVIADDEYCPKQGSRFPVKWTAPEAIIYGKFSIKSDVWSYGILLMELFTYGQVPYPGM
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Template Sequence  LAARNVLVSEDNVAKVSDFGLTK. . . . . . . . . . EAGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI
Template Known Secondary structure 

GGG
TT




TT
B..........





TTTS
TTT


TTT

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   315....320.........330....... ..340.........350.........360.........370.........380....
 
   485....490.........500.........510.........520.........530.........540...
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Query Sequence  HSREVIENIERGFRMPKPTNHYFPDNIYQLLLQCWDAVPEKRPTFEFLNHYFESFSVTS
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Template Sequence  PLKDVVPRVEKGYKMDAPDG. . CPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTHE
Template Known Secondary structure 
TTTTTT





TT..

T
SSGGGS

T
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   391........400.........410 .........420.........430.........440.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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