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Job DescriptionQ08012
Confidence99.88%DateWed Feb 13 11:17:06 GMT 2013
Rank11Aligned Residues155
% Identity23%Templatec3qwyA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:cell death abnormality protein 2; PDBTitle: ced-2
Resolution2.52 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   51........60.........70........ .80.........90.........100.. .......110.... ....
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Query Sequence  NYIEMKNHDWYYGRITRADAEKLLSNKH. . EGAFLIRISESSPGDFSLSVKCPD. . . GVQHFKVLRDAQ. . . . . . . SKFF
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Template Sequence  GFDPFEWRSFYFPGMSREEAHKLLGEPQVSIGTFLMRDSSR. PGEYSLTVREADEGNAVCHYLIERGEPKEDGTAAAGVK
Template Known Secondary structure 


GGGGGGGTT

STT

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   5....10.........20.........30.........40..... ....50.........60.........70.........80...
 
   119120.........130.........140.........150.........160.........170.........180.........190.... ...
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Query Sequence  LWVVKFNSLNELVEYHRTASVSRSQDVKLRDMIPEEMLVQALYDFVPQESGELDFRRGDVITVTDRSDENWWNGEI. GNR
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Template Sequence  IANQSFPDIPALLNHFKMRVLTEASLLAAYK. KPIIEVVVGTFKFTGERETDLPFEQGERLEILSKTNQDWWEARNALGT
Template Known Secondary structure  TTSSS
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   84.....90.........100.........110.... .....120.........130.........140.........150.........160..
 
   198.200.......
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Query Sequence  KGIFPATYVT
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Template Sequence  TGLVPANYVQ
Template Known Secondary structure  GGG
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   163......170..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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