Return to main results Retrieve Phyre Job Id

Job DescriptionQ08012
Confidence99.73%DateWed Feb 13 11:17:06 GMT 2013
Rank76Aligned Residues94
% Identity18%Templatec2rqrA_
PDB info PDB header:protein bindingChain: A: PDB Molecule:engulfment and cell motility protein 1, linker, dedicator PDBTitle: the solution structure of human dock2 sh3 domain - elmo1 peptide2 chimera complex
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   113......120.........130.........140.........150.........160.........170.........180.........190..
Predicted Secondary structure 
























































Query SS confidence 















































































Query Sequence  AQSKFFLWVVKFNSLNELVEYHRTASVSRSQDVKLRDMIPEEMLVQALYDFVPQESGELDFRRGDVITVTDRSDENWWNG
Query Conservation                                                
 
 
 
    



  

 
 

 
   


 
Alig confidence 







































































.






Template Conservation 
  

      
                                  




 
    



  

 
 
 
 .    
  
Template Sequence  PDAPPPIPKEPSNYDFSGPSSGIEGRGSSGSSGSSGSSGDKERHGVAIYNFQGSGAPQLSLQIGDVVRIQET. CGDWYRG
Template Known Secondary structure 
SS







SS



SS


TTTT








S
S



B
S
B


STTB

B
TT
.TT
Template Predicted Secondary structure 




















































.





Template SS confidence 















































































   18.20.........30.........40.........50.........60.........70.........80......... 90......
 
   193. .....200.......
Predicted Secondary structure  ...



Query SS confidence 

. . .












Query Sequence  EI. . . GNRKGIFPATYVT
Query Conservation    ... 
  
 

 


 
Alig confidence 

...












Template Conservation        
  
 

 


 
Template Sequence  YLIKHKMLQGIFPKSFIH
Template Known Secondary structure  SS
TT
GGGB
Template Predicted Secondary structure 






Template SS confidence 

















   97..100.........110....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions