Return to main results Retrieve Phyre Job Id

Job DescriptionQ08012
Confidence99.92%DateWed Feb 13 11:17:06 GMT 2013
Rank7Aligned Residues162
% Identity28%Templatec2eyyA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:v-crk sarcoma virus ct10 oncogene homolog PDBTitle: ct10-regulated kinase isoform i
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   50.........60.........70.........80.........90.........100.........110.........120.........
Predicted Secondary structure 





























































Query SS confidence 















































































Query Sequence  SNYIEMKNHDWYYGRITRADAEKLLSNKHEGAFLIRISESSPGDFSLSVKCPDGVQHFKVLRDAQSKFFLWVVKFNSLNE
Query Conservation                                                                                  
Alig confidence 















































































Template Conservation            

 
   
  

 

     
 



 
 
    
 

        
  
                
   
Template Sequence  GNFDSEERSSWYWGRLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQPPPGV
Template Known Secondary structure 



SS
TTTTBSS


TTS
TTB


SSSTT


TTS




S
SSS

S




S
Template Predicted Secondary structure 
























































Template SS confidence 















































































   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   130..... ....140.........150.........160.........170.........180..
Predicted Secondary structure 





...........................































Query SS confidence 





. . . . . . . . . . . . . . . . . . . . . . . . . . .














































Query Sequence  LVEYHR. . . . . . . . . . . . . . . . . . . . . . . . . . . TASVSRSQDVKLRDMIPEEMLVQALYDFVPQESGELDFRRGDVITVT
Query Conservation        ...........................                       
 
 
 
    



  

 
 

Alig confidence 





...........................














































Template Conservation      
      
 

  

  
   
        
                     

         

    

 
 
 
Template Sequence  SPSRLRIGDQEFDSLPALLEFYKIHYLDTTTLIEPVSRSRQGSGVILRQEEAEYVRALFDFNGNDEEDLPFKKGDILRIR
Template Known Secondary structure 
SS

TTS

S
TTTT
SSS



B



S

TTGGG












SSSSB



TT
Template Predicted Secondary structure 




























































Template SS confidence 















































































   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   183......190.... .....200.........210.
Predicted Secondary structure 



.





Query SS confidence 











.
















Query Sequence  DRSDENWWNGEI. GNRKGIFPATYVTPYHS
Query Conservation   
   


 
  . 
  
 

 


 

  
Alig confidence 











.
















Template Conservation        
          
  
  

     
Template Sequence  DKPEEQWWNAEDSEGKRGMIPVPYVEKYRP
Template Known Secondary structure  TT
TTS

SSS
B



Template Predicted Secondary structure 












Template SS confidence 





























   163......170.........180.........190..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions