Job Description Q9VXH3 Confidence 98.14% Date Wed Feb 13 11:23:55 GMT 2013 Rank 364 Aligned Residues 125 % Identity 10% Template c3sibA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:ure3-bp sequence specific dna binding protein; PDBTitle: crystal structure of ure3-binding protein, wild-type Resolution 1.90 Å

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		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		L	R	R	E	Y	Y	Q	I	E	N	V	N	T	H	S	A	K	A	T	E	Q	S	P	A	Q	V	T	I	K	D	F	K	L	F	L	A	G	V	S	C	K	M	T	T	G	K	F	M	E	H	F	T	E	.	D	V	R	R	K	H	D	L	K	F	D	D	F	S	R	L	Y	Q	K	L	L	L	P	N	G	F
Query Conservation																																																							.
Alig confidence							.	.	.	.	.	.	.	.	.	.																																							.
Template Conservation							.	.	.	.	.	.	.	.	.	.
Template Sequence		I	Y	Q	W	F	.	.	.	.	.	.	.	.	.	.	M	G	V	D	R	D	R	S	G	T	L	E	I	N	E	L	M	M	G	Q	F	P	G	G	I	R	L	S	P	Q	T	A	L	R	M	M	R	I	F	D	T	D	F	N	G	H	I	S	F	Y	E	F	M	A	M	Y	K	F	M	E	L	A	Y	N	L
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.					T	T			S	S	B											G	G	G																	T	T		S	S		B
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		53	.	.	.	.											.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	V	L	S	G	S	G	V	A	N	F	P	Y	S	E	D	Q	Q	V	V	R	P	A	E	L	K	Q	F	L	E	T	E	Q	R	D	V	S	A	S	E	I	S	S	A	A	I	A	S	F	I	R	D	F	V	Q	D	V	E	R	D	V	Q	E	P	Y	L	T	F	P	E	F	V	D	F	L
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.																						.	.	.	.	.															.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.																						.	.	.	.	.															.	.	.	.	.	.
Template Sequence		F	V	M	N	D	.	.	.	.	.	.	.	.	.	R	N	R	S	G	T	L	E	P	H	E	I	L	P	A	L	Q	Q	L	G	F	.	.	.	.	.	Y	I	N	Q	R	T	S	L	L	L	H	R	L	F	.	.	.	.	.	.	A	R	G	M	A	F	C	D	L	N	C	W	I	A	I	C
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	T	T			S				G	G	G									T		.	.	.	.	.															.	.	.	.	.	.	S	T	T		S	S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.																						.	.	.	.	.															.	.	.	.	.	.
Template SS confidence
		123	.	.	.	.										.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.						.	150	.	.	.	.	.	.	.	.	.	160	.	.							.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions