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Job DescriptionQ9VXH3
Confidence100.00%DateWed Feb 13 11:23:55 GMT 2013
Rank2Aligned Residues708
% Identity35%Templatec3qr0A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:phospholipase c-beta (plc-beta); PDBTitle: crystal structure of s. officinalis plc21
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30.........40.........50.........60.........70.........80....
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Query Sequence  PLLGEMEQTIGMLERGTIVTKLYGKQRRPDRRHLMLIRETRQLLWATVATQTPRTDYEGAIQLREIREIRVGKHS. . . . .
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Template Sequence  PKVP. . . . . . EQLIKGDKFLKWEEGSSGFIEILLRVDPKGYFLYWKIEGKEDTQ. . . . . LLDLAYVRDIRCAKYAKPPKD
Template Known Secondary structure 



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TT




TTS


TT
SS
.....GGGGGGS



S
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   16... 20.........30.........40.........50.........60... ......70.........80....
 
   85....90.........100.........110. ........120.........130.........140.........150.........160
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Query Sequence  . . . KEFRLFADDCQRFESSKCFVILHGNHF. KLKSFSVVALSEIEADNWVRGLRYMVKDTLGAPYPLQIDRWLRREYYQI
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Template Sequence  KKIKEAGTNFGSSNIPLQDKCVTICHGYNYIDLEWTHLVAENSSVAKKWSEEVFSYAYNLLSLNKNQLG. . EWEKLYFR.
Template Known Secondary structure  SS
TTS

SSSSS
SST
T

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   85....90.........100.........110.........120.........130.........140.........150... ......160.
 
   161........170.........180........ .190.........200..... ....210.........220.........230....
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Query Sequence  ENVNTHSAKATEQSPAQVTIKDFKLFLA. . . . . GVSCKMTTGKFMEHFTE. DVRRKHDLKFDDFSRLYQKLLLPNGFASV
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Template Conservation  .......          
  
 
 

          
      
   
   
      
 
 

  
   
  
 

  
Template Sequence  . . . . . . . LTTVEMEKNKIPVKAIQKCLSKDKDDRARISKALEKIGWPSGKNDAIDLKAFDFDTFFKFYLALLERSEIEGI
Template Known Secondary structure  .......TS

SS
S
TS

STT
TTT




T
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   162.......170.........180.........190.........200.........210.........220.........230....
 
   235....240.........250.........260.........270... ......280......... 290.........300.......
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Query Sequence  LSGSGVANFPYSEDQQVVRPAELKQFLETEQRDVSASEI. . . . . SSAAIASFIRDFVQDV. . ERDVQEPYLTFPEFVDFL
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Template Sequence  FKEL. . . . . . . SKNKGNITTVMFRDFLNDMQRHPSLHKTLFPLYTDAQCEALINDY. ESAVNKKGKKKGQLTKEGLLYFL
Template Known Secondary structure  .......TTTSSSTSS
TTS
TTTS



.GGG
BTT
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   235... .240.........250.........260.........270.........280... ......290.........300......
 
   308.310.........320.........330.........340.........350.........360.........370.........380.......
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Query Sequence  FSKQNDLWNSKYDQVFMDMNLPLSSYWIASSHNTYLTGDQFSSESSCEAYARALRMGCRCIELDCWNGPDNLPYIFHGHT
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Template Sequence  MCEENNLTPMHRLDLGANMKLTLAAYYINSSHNTYLTGHQLTGKSSVEIYRQVLLTGCRCLELDCWDGKDGEPIITHGFT
Template Known Secondary structure  SGGG
SS
SS
S


S
GGG
BBSSTTBSS
TTTS
B
STT



TTSS


TTS
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   307..310.........320.........330.........340.........350.........360.........370.........380......
 
   388.390.........400.........410.........420.........430.........440.........450.. .......460...
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Query Sequence  ITSKIKFMDVIKTIKDHAFTSSEYPVILSIEQNCSLEQQRNMAQALIEVFGDMLLTQPCDRNEQH. . . . LPSPYQLRRKI
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Template Sequence  MCTEVLFKDVVYAIAESAFKVSDYPVILSFENHCSVAQQKLLAQYCNEAFGELLLDKPIDGHPLKPGVPLPTPYDLRKKI
Template Known Secondary structure  S


TTSS

S



GGGB

S

TT

SSTT




TTTTTT
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   387..390.........400.........410.........420.........430.........440.........450.........460......
 
   464.....470.........480.........490.........500.........510.........520.........530.........540...
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Query Sequence  ILKHKKLPQFDDIANGISSTGSLGHRSSLGGAGGGAHGENDGENVRKVFKEGLLYFKDPVDKSWNLYQFVLTHQELIYSS
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Template Sequence  LIKNKKMHGLTD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   467..470........
 
   544.....550.........560.........570.........580.........590.........600.........610.........620...
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Query Sequence  EINESRNGNSEDDDFGLSSSCSLNSNMQQKQKDTSANDELHFGENWFHGKLEGGRKEADDLLKKYKHFGDGTFLVRESAT
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Template Conservation  ................................................................................
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  ................................................................................
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   624.....630.........640.........650.........660.........670.........680.........690.........700...
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Query Sequence  FVGDYSLSFWRRNRPNHCRIKLKHENGSIKYYLVENFVFDSLYSLIVYYRKNMLRSSEFSIILKEPVPQPKKHEDQEWFH
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Template Conservation  ................................................................................
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   704.....710.........720.........730.........740.........750.........760.........770.........780...
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Query Sequence  PNTTKEQAEQGLYRLEIGSFLVRPSVQSINAFVISFTINRKIKHCRIMQEGRLYGIDTMNFESLVSLINYYTRNPLYRNV
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   784.....790.........800.........810.........820.........830.........840.........850.........860...
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Query Sequence  KLSHPVSQELLRQALAEAAQGDHSGGHDDNGASNYMGSNLEENVTCKALYSYKANKPDELSFPKHAIITNVQRDNSMWWI
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   864.....870.........880.........890.........900.........910.........920.........930.........940...
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Query Sequence  GDYGGMIKKHLPANYVKVIDSTTEDYNSLNEEGTDGRTDSIEIFGAVASLFESNDPGIIFKLQIQTPTMQNPFVIGFDNQ
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   944.....950.........960.........970.........980.........990... ......1000.........1010........
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Query Sequence  ETAYEWIKAIQEAALIASQLASERRKKERTARVAKEMSDLIIYFRSVPFR. . . . . EHSWIFQEMSSFPETKAEKQFFQQN
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Template Sequence  . . . . . . . . . . . EEKKKIEKEKKDAGTAAKEAEAAEEMSALVNYIQPVHFTTFEQAQKKDRHYEMSSMVETQALNKL. KDN
Template Known Secondary structure  ...........GGGGS




TT
SSS




T
TT.
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   489490.........500.........510.........520.........530.........540.........550... ...
 
   10191020.........1030.........1040.........1050.........1060.........1070.........1080.........1090..... .
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Query Sequence  TQLFLSYHRNQISRVYPKGQRLDSSNFNPMPFWNVGSQMIALNYQTGDKAMQLNQAKFRNNGQCGYILKPSFMKSDS. . F
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Template Sequence  PEDFVDYNKKQITRIYPKGTRVDSSNYVPQIYWNAGCQLVALNFQCFDIAMCVNLGVFEYNGCSGYLLKPEFMRKLDKRF
Template Known Secondary structure  TTTS


TT
TT




TTTT
S
B
TT

STTTTTT
S


TT


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   557..560.........570.........580.........590.........600.........610.........620.........630......
 
   1097..1100.. .......1110.........1120.........1130.........1140.... .....1150.........1160... ... ...1170.
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Query Sequence  NPNNPL. CDGLSEVKVSIRLIAARHLFRGGKSNNPQIVVELIGASFDTG. . VKYRTKVNENGFNPVWNES. CEF. NVRNP
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Template Sequence  DPFTESTVDGVVAGTIEIKIISAQFLSDKQ. . ISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLP
Template Known Secondary structure 
TT

S

TTS




SS
..

SSGGG



B
S
SS

B




S
G
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   637..640.........650.........660...... ...670.........680.........690.........700.........710....
 
   1172.......1180.........1190.........1200.........1210.........1220.........1230..
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Query Sequence  QFAILRFEVQDEDMFAETHFIAQACYPLTCIRQGYRSVILRNKFSEELELSSLLINIKIAN
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Template Sequence  DLAVVRIIVSEEN. . . . GKFIGHRVMPLDGIKPGYRHVPLRNESNRPLGLASVFAHIVAKD
Template Known Secondary structure  GG
TT....S
STT



TTS
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   715....720....... ..730.........740.........750.........760.........770.
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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