Return to main results Retrieve Phyre Job Id

Job DescriptionQ9VXH3
Confidence97.94%DateWed Feb 13 11:23:55 GMT 2013
Rank375Aligned Residues92
% Identity20%Templatec3no3A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:glycerophosphodiester phosphodiesterase; PDBTitle: crystal structure of a glycerophosphodiester phosphodiesterase2 (bdi_0402) from parabacteroides distasonis atcc 8503 at 1.89 a3 resolution
Resolution1.89 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   345....350.........360.........370.........380........ .390.........400...
Predicted Secondary structure 




















.....................


Query SS confidence 











































. . . . . . . . . . . . . . . . . . . . .














Query Sequence  GDQFSSESSCEAYARALRMGCRCIELDCWNGPDNLPYIFHGHTI. . . . . . . . . . . . . . . . . . . . . TSKIKFMDVIKTIKD
Query Conservation 
 
  
 

 
 
  

  











    
 
 

 
 .....................

 
 
 


  
  
Alig confidence 











































.....................














Template Conservation       



  
   
   
   

 

 

 

  

 

  
 
  
   
  

  
       



 
 
     
Template Sequence  KTEGSAQNSIRSLERASEIGAYGSEFDVHLTADNVLVVYHDNDIQGKHIQSCTYDELKDLQLSNGEKLPTLEQYLKRAKK
Template Known Secondary structure  SSTT

TTSTT
S
TTS

SSSTTGGGS
TT
B
TTS
B

B
Template Predicted Secondary structure 






































Template SS confidence 















































































   35....40.........50.........60.........70.........80.........90.........100.........110....
 
   404.....410.........420.........430.........440
Predicted Secondary structure 












Query SS confidence 




































Query Sequence  HAFTSSEYPVILSIEQNCSLEQQRNMAQALIEVFGDM
Query Conservation   

  
 

 




 


  

  

       
  
Alig confidence 
....































Template Conservation   ....    
 



                      
Template Sequence  L. . . . KNIRLIFELKSHDTPERNRDAARLSVQXVKRX
Template Known Secondary structure 
....TT



SST
Template Predicted Secondary structure 
....









Template SS confidence 




































   115 ....120.........130.........140.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions