Job Description Q9VXH3 Confidence 99.38% Date Wed Feb 13 11:23:55 GMT 2013 Rank 54 Aligned Residues 121 % Identity 24% Template c3m7fB_ PDB info PDB header:signaling protein/ligase Chain: B: PDB Molecule:e3 ubiquitin-protein ligase nedd4; PDBTitle: crystal structure of the nedd4 c2/grb10 sh2 complex Resolution 2.00 Å

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		1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	S	I	R	L	I	A	A	R	H	L	F	R	G	G	K	S	N	N	P	Q	I	V	V	E	L	I	G	A	S	F	D	T	G	V	K	Y	R	T	K	V	N	E	N	G	F	N	P	V	W	N	E	S	C	E	F	N	V	R	N	P	Q	F	A	I	L	R	F	E	V	Q	D	E	D	M	F	A	E	T
Query Conservation
Alig confidence																		.																																															.												.	.	.	.
Template Conservation																		.																																															.												.	.	.	.
Template Sequence		V	V	R	V	K	V	I	A	G	I	G	L	A	I	L	G	.	A	S	D	P	Y	V	R	V	T	L	Y	D	P	M	S	G	I	L	T	S	V	Q	T	K	T	I	K	K	S	L	N	P	K	W	N	E	E	I	L	F	R	V	L	P	Q	R	.	H	R	I	L	F	E	V	F	D	E	N	.	.	.	.	D
Template Known Secondary structure												S						.													T	T	T												S	S		S	S													T	T	T	.												.	.	.	.
Template Predicted Secondary structure																		.																																															.												.	.	.	.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.					.
		1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.				.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.
Query SS confidence																		.	.	.
Query Sequence		H	F	I	A	Q	A	C	Y	P	L	T	C	I	R	Q	G	.	.	.	Y	R	S	V	I	L	R	N	K	F	S	E	E	L	E	L	S	S	L	L	I	N	I	K	I	A	N	V	T	A	P
Query Conservation																		.	.	.
Alig confidence																		.	.	.
Template Conservation
Template Sequence		D	F	L	G	Q	V	D	V	P	L	Y	P	L	P	T	E	P	Y	T	F	K	D	F	V	L	H	P	R	S	H	K	S	R	V	K	G	Y	L	R	L	K	M	T	Y	L	P	T	H	L	P
Template Known Secondary structure											S		S			B											B		S	S	T	T					S
Template Predicted Secondary structure
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions