Job Description Q9VXH3 Confidence 99.34% Date Wed Feb 13 11:23:55 GMT 2013 Rank 70 Aligned Residues 111 % Identity 22% Template c3kwtA_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:munc13-1; PDBTitle: munc13-1 c2b-domain, calcium-free Resolution 1.89 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.		.	.	.	.	.	1180	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		K	V	S	I	R	L	I	A	A	R	H	L	F	R	G	G	K	S	N	N	P	Q	I	V	V	E	L	I	G	A	S	F	D	T	G	V	K	Y	R	T	K	V	N	E	N	G	F	N	P	V	W	N	E	S	C	E	F	N	V	R	N	P	Q	F	A	.	I	L	R	F	E	V	Q	D	E	D	M	F	A	E
Query Conservation																																																																			.
Alig confidence																													.	.	.	.	.															.																			.
Template Conservation																													.	.	.	.	.															.
Template Sequence		K	I	S	I	T	V	V	C	A	Q	G	L	Q	A	K	D	G	S	S	D	P	Y	V	T	V	Q	V	.	.	.	.	.	G	K	T	K	K	R	T	K	T	I	Y	G	N	L	.	N	P	V	W	E	E	N	F	H	F	E	C	H	N	S	S	D	R	I	K	V	R	V	L	D	E	D	D	D	I	K	E	S
Template Known Secondary structure												S																	.	.	.	.	.	T	T										S		S	.	S														T	T												S
Template Predicted Secondary structure																													.	.	.	.	.															.
Template SS confidence
		690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.						.	.	.	720	.	.	.	.	.	.	.	.	.	730		.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.
		1189	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.		.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		T	H	F	I	A	Q	A	C	Y	P	L	T	C	I	R	Q	G	Y	R	S	.	V	I	L	R	N	K	F	S	E	E	L	E	L	S	S	L	L	I	N	I	K	I	A
Query Conservation																						.
Alig confidence																						.				.	.	.	.	.
Template Conservation																										.	.	.	.	.
Template Sequence		D	D	F	L	G	Q	T	I	I	E	V	R	T	L	S	G	E	M	D	V	W	Y	N	L	.	.	.	.	.	D	K	R	V	S	G	A	I	R	L	H	I	S	V	E
Template Known Secondary structure												G	G	G			S									.	.	.	.	.	B
Template Predicted Secondary structure																										.	.	.	.	.
Template SS confidence
		775	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.						.	800	.	.	.	.	.	.	.	.	.	810	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions