Job Description Q9VXH3 Confidence 99.03% Date Wed Feb 13 11:23:55 GMT 2013 Rank 149 Aligned Residues 86 % Identity 20% Template c3gxxB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcription elongation factor spt6; PDBTitle: structure of the sh2 domain of the candida glabrata2 transcription elongation factor spt6, crystal form b Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		586	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	N	W	F	H	G	K	L	E	G	G	R	K	E	A	D	D	L	L	K	K	Y	K	H	F	G	D	G	T	F	L	V	R	E	S	A	T	F	V	G	D	Y	S	L	S	F	W	R	R	N	R	P	N	H	C	R	I	K	L	K	H	E	N	G	S	I	K	Y	Y	L	V	E	N	F	V	F	D	S	L
Query Conservation
Alig confidence								.				.	.										.	.	.
Template Conservation								.				.	.										.	.	.
Template Sequence		N	H	P	Y	Y	F	.	P	F	N	.	.	G	K	Q	A	E	D	Y	L	R	.	.	.	S	K	E	R	G	D	F	V	I	R	Q	S	S	R	G	D	D	H	L	A	I	T	W	K	L	D	K	D	L	F	Q	H	V	D	I	Q	E	X	E	K	E	X	G	K	V	L	V	V	E	G	Q	R	Y	H	D	L
Template Known Secondary structure		T		T	T	B		.				.	.									T	.	.	.	T	S		T	T									S	T	T											T	T																				S	S	S				S	S
Template Predicted Secondary structure								.				.	.										.	.	.
Template SS confidence
		9	10	.	.	.	.		.	.	.			.	.	20	.	.	.	.	.	.				.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		666	.	.	.	670	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	S	L	I	V	Y	Y	R	K	N	M	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	Q	I	I	V	E	Y	L	Q	N	K	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions