Phyre 2 alignment of Q9VXH3 with c3ctnA

Job Description Q9VXH3
Confidence 97.20% Date Wed Feb 13 11:23:55 GMT 2013

Rank 441 Aligned Residues 66

% Identity 12% Template c3ctnA_

PDB info PDB header:calcium-binding protein Chain: A: PDB Molecule:troponin c; PDBTitle: structure of calcium-saturated cardiac troponin c, nmr, 302 structures

Resolution UNK

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence	D	R	W	L	R	R	E	Y	Y	Q	I	E	N	V	N	T	H	S	A	K	A	T	E	Q	S	P	A	Q	V	T	I	K	D	F	K	L	F	L	A	G	V	S	C	K	M	T	T	G	K	F	M	E	H	F	T	E	.	D	V	R	R	K	H	D	L	K	F	D	D	F	S	R	L	Y	Q	K	L
Query Conservation																																																									.
Alig confidence									.	.	.	.	.	.	.	.	.	.																																							.
Template Conservation									.	.	.	.	.	.	.	.	.	.
Template Sequence	E	E	E	L	S	D	L	F	.	.	.	.	.	.	.	.	.	.	R	M	F	D	K	N	A	D	G	Y	I	D	L	E	E	L	K	I	M	L	Q	A	T	G	E	T	I	T	E	D	D	I	E	E	L	M	K	D	G	D	K	N	N	D	G	R	I	D	Y	D	E	F	L	E	F	M	K	G	V
Template Known Secondary structure									.	.	.	.	.	.	.	.	.	.					S	S		S	S	S												T	T																	S	S	S		S	S													T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.
Template SS confidence
	94	.	.	.	.	.	100	.											.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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