Job Description Q9VXH3 Confidence 99.53% Date Wed Feb 13 11:23:55 GMT 2013 Rank 31 Aligned Residues 164 % Identity 15% Template c2xp1A_ PDB info PDB header:transcription Chain: A: PDB Molecule:spt6; PDBTitle: structure of the tandem sh2 domains from antonospora locustae2 transcription elongation factor spt6 Resolution 2.20 Å

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		585	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.		.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		F	G	E	N	W	F	H	G	K	L	E	G	G	R	K	E	A	D	D	L	L	K	K	Y	K	H	F	G	D	G	T	F	L	V	R	E	S	A	T	F	V	G	D	Y	S	L	S	F	W	R	R	N	R	P	.	N	H	C	R	I	K	L	K	H	E	N	G	S	I	K	Y	Y	L	V	E	N	F	V	F	D
Query Conservation																																																								.
Alig confidence									.				.	.											.	.	.	.											.																	.						.	.	.	.	.
Template Conservation									.				.	.											.	.	.	.											.																							.	.	.	.	.
Template Sequence		Y	K	H	P	L	F	K	.	N	F	N	.	.	V	T	E	S	E	N	Y	L	R	S	.	.	.	.	S	T	D	D	F	L	I	R	K	G	.	S	R	H	G	Y	C	V	L	V	I	K	F	A	S	D	V	F	V	H	M	K	I	.	.	.	.	.	E	E	H	S	E	H	Y	T	C	S	N	K	H	F	E
Template Known Secondary structure		G	G	S	T	T			.				.	.											.	.	.	.	S	S									.	S	S	T	T										T	T								.	.	.	.	.				S	S					T	T				S
Template Predicted Secondary structure									.				.	.											.	.	.	.											.																							.	.	.	.	.
Template SS confidence
		790	.	.	.	.	.	.		.	.	.			800	.	.	.	.	.	.	.	.	.					810	.	.	.	.	.	.	.	.	.		820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.						.	.	.	.	.	.	.	.	850	.	.	.	.	.	.
		664	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	Y	S	L	I	V	Y	Y	R	K	N	M	L	R	S	S	E	F	S	I	I	L	K	E	P	V	P	Q	P	K	K	H	E	D	Q	E	W	F	H	P	N	T	T	K	E	Q	A	E	Q	G	L	Y	R	L	E	I	G	S	F	L	V	R	P	S	V	Q	S	I	N	A	F	V	I	S	F	T	I	N	R
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.						.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.						.	.	.
Template Sequence		D	I	D	E	V	I	S	V	Y	V	R	P	I	L	R	N	L	K	.	.	.	.	.	.	.	.	.	.	S	I	K	A	H	.	.	.	A	K	Y	F	N	S	P	E	D	A	E	K	L	L	S	S	F	D	G	S	K	V	V	Y	A	F	Y	F	S	R	K	Y	P	G	K	L	T	F	A	Y	N	N	G	S
Template Known Secondary structure		S								T										.	.	.	.	.	.	.	.	.	.					S	.	.	.	T	T	B		S		T	T	T	S						T			S	S	S									S	S	S	T	T								S	S	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.						.	.	.
Template SS confidence
		857	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.											.	.	.	.	.				880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.
		744	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	K	H	C	R	I	M	Q	E	G	R	L	Y	G	I	D	T	M	N	F	E	S	L	V	S	L	I	N	Y	Y	T	R
Query Conservation
Alig confidence													.	.
Template Conservation													.	.
Template Sequence		I	L	E	E	Y	I	G	V	S	D	M	.	.	L	T	Y	N	N	S	T	F	K	D	I	D	S	F	V	A	Y	R	K	R
Template Known Secondary structure										S	S	S	.	.				T	T				S	S
Template Predicted Secondary structure													.	.
Template SS confidence
		924	.	.	.	.	.	930	.	.	.	.			.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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