Return to main results Retrieve Phyre Job Id

Job DescriptionQ9VXH3
Confidence98.69%DateWed Feb 13 11:23:55 GMT 2013
Rank208Aligned Residues71
% Identity24%Templatec2rqvA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:bud emergence protein 1; PDBTitle: solution structure of sh3ci domain of bem1p
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   823......830.........840.........850.........860.........870 .........880.........890...
Predicted Secondary structure 





































..


















Query SS confidence 















































. .






















Query Sequence  LEENVTCKALYSYKANKPDELSFPKHAIITNVQRDNSMWWIGDYGGMI. . KKHLPANYVKVIDSTTEDYNSLN
Query Conservation          

    
    



 

 

 
  

  


 
    

..

 

  


             
Alig confidence 















































..






















Template Conservation 
    

 




      


   

 
 
       
         
  
  
  

   
          
Template Sequence  PLGSLYAIVLYDFKAEKADELTTYVGENLFICAHHNCEWFIAKPIGRLGGPGLVPVGFVSIIDIATGYATGND
Template Known Secondary structure 

S


SS




SSSB



SS



TTT

SSSS


STT
B


SSSS


S

Template Predicted Secondary structure 




































Template SS confidence 








































































   154.....160.........170.........180.........190.........200.........210.........220......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions