Job Description Q9VXH3 Confidence 97.06% Date Wed Feb 13 11:23:55 GMT 2013 Rank 464 Aligned Residues 127 % Identity 14% Template c2hpkA_ PDB info PDB header:luminescent protein Chain: A: PDB Molecule:photoprotein berovin; PDBTitle: crystal structure of photoprotein berovin from beroe2 abyssicola Resolution 2.00 Å

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		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.										.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.											.
Query SS confidence																																													.	.	.	.	.	.	.	.	.											.
Query Sequence		L	R	R	E	Y	Y	Q	I	E	N	V	N	T	H	S	A	K	A	T	E	Q	S	P	A	Q	V	T	I	K	D	F	K	L	F	L	A	G	V	S	C	K	M	T	.	.	.	.	.	.	.	.	.	T	G	K	F	M	E	H	F	T	E	.	D	V	R	R	K	H	D	L	K	F	D	D	F	S	R	L	Y
Query Conservation																																													.	.	.	.	.	.	.	.	.											.
Alig confidence							.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.											.
Template Conservation							.	.	.	.	.	.	.	.	.	.
Template Sequence		L	Y	K	R	F	.	.	.	.	.	.	.	.	.	.	D	T	F	D	L	D	S	D	G	K	X	E	X	D	E	V	L	Y	W	P	D	R	X	R	Q	L	V	N	A	T	D	E	Q	V	E	K	X	R	D	A	V	R	V	F	F	L	H	K	G	V	E	P	V	N	G	L	L	R	E	D	W	V	E	A	N
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.					T	T		S	S								T										S																					T	T		B	T	T	T	B			G	G	G
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		38	.	40	.	.											.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		223	.	.	.	.	.	.	230															.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	K	L	L	L	P	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	A	S	V	L	S	G	S	G	V	A	N	F	P	Y	S	E	D	Q	Q	V	V	R	P	A	E	L	K	Q	F	L	E	T	E	Q	R	D	V	S	A	S	E	I	S	S	A	A	I	A	S	F	I	R	D	F	V	Q	D
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.																				.	.	.	.	.	.	.															.	.	.
Template Conservation																																	.	.	.	.	.	.																				.	.	.	.	.	.	.															.	.	.
Template Sequence		R	V	F	A	E	A	E	R	E	R	E	R	R	G	E	P	S	L	I	A	L	L	S	N	S	Y	Y	D	V	L	D	.	.	.	.	.	.	D	D	G	D	G	T	V	D	V	D	E	L	K	T	X	X	K	A	F	.	.	.	.	.	.	.	D	V	P	Q	E	A	A	Y	T	F	F	E	K	A	.	.	.
Template Known Secondary structure														T	T																		.	.	.	.	.	.	T	T		S	S	S	B												T	.	.	.	.	.	.	.	T	S		T	T										.	.	.
Template Predicted Secondary structure																																	.	.	.	.	.	.																				.	.	.	.	.	.	.															.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.							.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.								.	.	160	.	.	.	.	.	.	.	.	.	170	.
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	R	D	V	Q	E	P	Y	L	T	F	P	E	F	V	D	F	L
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	D	T	D	K	S	G	K	L	E	R	T	E	L	V	H	L	F
Template Known Secondary structure		.	.		T	T			S	S	B
Template Predicted Secondary structure		.	.
Template SS confidence
				172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions