 |
| Job Description | Q9VXH3 | | Confidence | 99.14% | Date | Wed Feb 13 11:23:55 GMT 2013 |
| Rank | 131 | Aligned Residues | 93 |
| % Identity | 23% | Template | c2enpA_ |
| PDB info |
PDB header:transport protein | Chain: A: PDB Molecule:b/k protein; |
PDBTitle: solution structure of the first c2 domain from human b/k2 protein
|
| Resolution | UNK |
|
 |
|   |   |
1110 | . | . | . | . | . | . | . | . | . | 1120 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | 1130 | . | . | . | . | . | . | . | . | . | 1140 | . | . | . | . | . | . | . | . | . | 1150 | . | . | . | . | . | . | . | . | . | 1160 | . | . | . | . | . | . | . | . | . | 1170 | . | . | . | |
|
. | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  | . | . |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
| Query Sequence |   |
K | V | S | I | R | L | I | A | A | R | H | L | F | R | G | G | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
S | N | N | P | Q | I | V | V | E | L | I | G | A | S | F | D | T | G | V | K | Y | R | T | K | V | N | E | N | G | F | N | P | V | W | N | E | S | C | E | F | N | V | R | N | P | Q | F | . |
. |
A | I | L | R | F |
| Query Conservation |   |
  |   |   |
|   |
|
|
|   |
|   |
|
|   |   |   |   | . | . | . | . | . | . | . | . | . |   |   |   |
|   |
|   |
|
|
|   |
|   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |
|
|   |
|
|   |
|   |   |   |
|   |
|   |
|   |   |
|
|
| . | . |
|   |
|
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
| Template Conservation |   |
  |
|   |
|   |
|   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |   | . | . |   |   |   |   |   |   |   |   |   |
|   |   |   |   | . |   |
|   |   |
|   |   |   |
|   |
|   |
|   |
|   |   |   |   |
|   |   |   |   |
|   |
|
| Template Sequence |   |
H | L | T | V | R | V | I | E | A | R | D | L | P | P | P | I | S | H | D | G | S | R | Q | D | M | A | H | S | N | P | Y | V | K | I | C | L | . |
. |
L | P | D | Q | K | N | S | K | Q | T | G | V | K | R | . |
K | T | Q | K | P | V | F | E | E | R | Y | T | F | E | I | P | F | L | E | A | Q | R | R | T | L | L | L |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
| S |
| S | S |
|
| S | S |
| T | T |
|
|
|
|
|  |  |  |  |  |  | . | . |  | T |
|
| S | S |
|  |  |
|
|
|
|
| . | S |
| S | S |
|
|
|
| B |
|
|  |  |
|
|
|  |  |  |  |  |  | S |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  | . | . |  |
|
|
|
|  |  |  |  |  |  |  |  |  | . |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |
|
|
|
|  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
27 | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
|
. | . | . | . | . | . | . | 70 | . | . | . | . | . | . | |
. | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . |
|   |
|   |   |
1179 | 1180 | . | . | . | . | . | . | . | . | . | 1190 | . | . | . | . | . | . | . | . | . | 1200 | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
E | V | Q | D | E | D | M | F | A | E | T | H | F | I | A | Q | A | C | Y | P | L | T | C | I | R | Q | G |
| Query Conservation |   |
  |
|   |
|   |
|   |   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |   |
|   |   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |
|   |   |   |   |   |   |
| Template Sequence |   |
T | V | V | D | F | D | K | F | S | R | H | C | V | I | G | K | V | S | V | P | L | C | E | V | D | L | V |
| Template Known Secondary structure |   |
 |  |  |
|
| S | T | T |
|
| S |
|
|
|  |  |  |  |  |  | T | T | T | S |
| T | T |
| Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
104 | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|