Return to main results Retrieve Phyre Job Id

Job DescriptionQ9VXH3
Confidence98.77%DateWed Feb 13 11:23:55 GMT 2013
Rank185Aligned Residues84
% Identity20%Templatec2cubA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:cytoplasmic protein nck1; PDBTitle: solution structure of the sh3 domain of the human2 cytoplasmic protein nck1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   811........820.........830.........840.........850.........860.........870.........880.........890
Predicted Secondary structure 

































































Query SS confidence 















































































Query Sequence  DDNGASNYMGSNLEENVTCKALYSYKANKPDELSFPKHAIITNVQRDNSMWWIGDYGGMIKKHLPANYVKVIDSTTEDYN
Query Conservation     
                

    
    



 

 

 
  

  


 
    



 

  


          
Alig confidence 


























































.



















Template Conservation 
      
          
 
 


      



  

 
 
       
      
 . 
  
  

           
Template Sequence  SSGSSGDPGERLYDLNMPAYVKFNYMAEREDELSLIKGTKVIVMEKCSDGWWRGSYNGQ. VGWFPSNYVTEEGDSPLGDH
Template Known Secondary structure 





SSS

B



SS




STTB



TT
TTSTT.GGG




SSS
Template Predicted Secondary structure 

































.








Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60 .........70.........80
 
   891....
Predicted Secondary structure 




Query SS confidence 




Query Sequence  SLNEE
Query Conservation       
Alig confidence 




Template Conservation       
Template Sequence  VGSGP
Template Known Secondary structure 

SS
Template Predicted Secondary structure 




Template SS confidence 




   81....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions