Return to main results Retrieve Phyre Job Id

Job DescriptionQ9VXH3
Confidence99.24%DateWed Feb 13 11:23:55 GMT 2013
Rank96Aligned Residues107
% Identity26%Templatec1x6cA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:tyrosine-protein phosphatase, non-receptor type PDBTitle: solution structures of the sh2 domain of human protein-2 tyrosine phosphatase shp-1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   585....590.........600.........610.........620.........630.........640....... ..650.........
Predicted Secondary structure 





































.....











Query SS confidence 






























































. . . . .











Query Sequence  FGENWFHGKLEGGRKEADDLLKKYKHFGDGTFLVRESATFVGDYSLSFWRRNRPNHCRIKLKH. . . . . ENGSIKYYLVEN
Query Conservation    
 





  

  

  
        
 





 
  






     
 
 

 
  .....         
  
Alig confidence 










..









..





































.....











Template Conservation      



 

..
 


 

  ..    
 



 
      
 


          
     
  
            
Template Sequence  GSSGWYHGHMS. . GGQAETLLQA. . KGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLRVTHIKVMCEGGRYTVGGL
Template Known Secondary structure 






SS

....

SS
SSSTT
SSSTTS
TTSSSS
Template Predicted Secondary structure 










....























Template SS confidence 















































































   4.....10.... .....20.... .....30.........40.........50.........60.........70.........
 
   660.........670.........680... ......690.....
Predicted Secondary structure 













.











Query SS confidence 























.











Query Sequence  FVFDSLYSLIVYYRKNMLRSSEFS. IILKEPVPQPKK
Query Conservation    
 

  

 

    
      .  
  




  
Alig confidence 























.











Template Conservation    
 

  

  
    
    
    
  
    

Template Sequence  ETFDSLTDLVEHFKKTGIEEASGAFVYLRQPYYSGPS
Template Known Secondary structure 

BSS

SSS







S
Template Predicted Secondary structure 






















Template SS confidence 




































   80.........90.........100.........110......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions