Job Description Q9VXH3 Confidence 99.24% Date Wed Feb 13 11:23:55 GMT 2013 Rank 101 Aligned Residues 125 % Identity 12% Template c1mv3A_ PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:myc box dependent interacting protein 1; PDBTitle: nmr structure of the tumor suppressor bin1: alternative2 splicing in melanoma and interaction with c-myc Resolution UNK

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		758	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	D	T	M	N	F	E	S	L	V	S	L	I	N	Y	Y	T	R	N	P	L	Y	R	N	V	K	L	S	H	P	V	S	Q	E	L	L	R	Q	A	L	A	E	A	A	Q	G	D	H	S	G	G	H	D	D	N	G	A	S	N	Y	M	G	S	N	L	E	E	N	V	T	C	K	A	L	Y	S	Y	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	P	S	Q	P	A	E	A	S	E	V	A	G	G	T	Q	P	A	A	G	A	Q	E	P	G	E	T	A	A	S	E	A	A	S	S	S	L	P	A	V	V	V	E	T	F	P	A	T	V	N	G	T	V	E	G	G	S	G	A	G	R	L	D	L	P	P	G	F	M	F	K	V	Q	A	Q	H	D	Y	T	A
Template Known Secondary structure															S	S																																															S	S			T	T								S	S		B
Template Predicted Secondary structure
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
		838	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.						.	.	.	.	.	860	.	.	.	.											.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.
Predicted Secondary structure																			.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Query Sequence		N	K	P	D	E	L	S	F	P	K	H	A	I	I	T	N	V	.	.	.	.	.	Q	R	D	N	S	M	W	W	I	G	.	.	.	.	.	.	.	.	.	.	D	Y	G	G	M	I	K	K	H	L	P	A	N	Y	V	K	V	I	D
Query Conservation																			.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.											.	.	.	.	.	.	.	.	.	.						.
Template Conservation																																																	.
Template Sequence		T	D	T	D	E	L	Q	L	K	A	G	D	V	V	L	V	I	P	F	Q	N	P	E	E	Q	D	E	G	W	L	M	G	V	K	E	S	D	W	N	Q	H	K	K	L	E	K	C	.	R	G	V	F	P	E	N	F	T	E	R	V	P
Template Known Secondary structure			S	T	T				B		S	S									S		G	G	G	S		T	T												T	G	G	G	G	G	G	T	.						S	T	T
Template Predicted Secondary structure																																																	.
Template SS confidence
		423	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.		470	.	.	.	.	.	.	.	.	.	480	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions