Job Description Q9VXH3 Confidence 99.27% Date Wed Feb 13 11:23:55 GMT 2013 Rank 85 Aligned Residues 104 % Identity 23% Template c1ka6A_ PDB info PDB header:immune system Chain: A: PDB Molecule:sh2 domain protein 1a; PDBTitle: sap/sh2d1a bound to peptide n-py Resolution UNK

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		585	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650			.	.	.	.	.	.	.	.	.	660	.	.
Predicted Secondary structure																																																																				.	.
Query SS confidence																																																																				.	.
Query Sequence		F	G	E	N	W	F	H	G	K	L	E	G	G	R	K	E	A	D	D	L	L	K	K	Y	K	H	F	G	D	G	T	F	L	V	R	E	S	A	T	F	V	G	D	Y	S	L	S	F	W	R	R	N	R	P	N	H	C	R	I	K	L	K	H	E	N	G	.	.	S	I	K	Y	Y	L	V	E	N	F	V	F
Query Conservation																																																																				.	.
Alig confidence													.	.													.	.																																								.	.
Template Conservation													.	.													.	.
Template Sequence		D	A	V	A	V	Y	H	G	K	I	S	.	.	R	E	T	G	E	K	L	L	L	A	T	G	.	.	L	D	G	S	Y	L	L	R	D	S	E	S	V	P	G	V	Y	C	L	C	V	L	Y	H	G	Y	I	Y	T	Y	R	V	S	Q	T	E	T	G	S	W	S	A	E	T	A	P	G	V	H	K	R	Y	F
Template Known Secondary structure					S	S	B			S			.	.													.	.		T	T								S	S	S	T	T								S	S	S											T	T	S							S	T	T	S
Template Predicted Secondary structure													.	.													.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.			.	.	.	.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		663	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	L	Y	S	L	I	V	Y	Y	R	K	N	M	L	R	S	S	E	F	S	I	I	L	K	E	P	V	P	Q	P	K	K
Query Conservation
Alig confidence																				.	.	.
Template Conservation																				.	.	.
Template Sequence		R	K	I	K	N	L	I	S	A	F	Q	K	P	D	Q	G	I	V	.	.	.	I	P	L	Q	Y	P	V	E	K	K	S	S
Template Known Secondary structure		S	S								T	T	S	S		S	S	S	S	.	.	.	S				S	B			S	S
Template Predicted Secondary structure																				.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.				.	.	.	.	100	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions