Return to main results Retrieve Phyre Job Id

Job DescriptionQ9VXH3
Confidence99.13%DateWed Feb 13 11:23:55 GMT 2013
Rank132Aligned Residues96
% Identity20%Templatec1dqvA_
PDB info PDB header:endocytosis/exocytosisChain: A: PDB Molecule:synaptotagmin iii; PDBTitle: crystal structure of synaptotagmin iii c2a/c2b
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1110.........1120........ .1130.........1140.........1150.........1160.........1170... ......1180.....
Predicted Secondary structure 








..
























..


Query SS confidence 


















. .












































. .











Query Sequence  KVSIRLIAARHLFRGGKSN. . NPQIVVELIGASFDTGVKYRTKVNENGFNPVWNESCEFNVRNPQF. . AILRFEVQDEDM
Query Conservation     
 


 
 

      .. 
 
 


 
   
     
  
  

 

 
   
 
 
  


..
 


 
 
 
 
Alig confidence 


















..









..













.

















..











Template Conservation   
 
 
  
  
   
  
  



 
 
  ..       
 
   
. 

 
 
 
 
 
         
 
 
 
   
Template Sequence  QLVVRILQALDLPAKDSNGFSDPYVKIYLLP. . DRKKKFQTKVHRKT. LNPIFNETFQFSVPLAELAQRKLHFSVYDFDR
Template Known Secondary structure 




STTS



TT..STTS





S
.SS


GGGGSS




S
Template Predicted Secondary structure 














..




.












Template SS confidence 















































































   313......320.........330.........340... ......350....... ..360.........370.........380.........
 
   1186...1190.........1200........
Predicted Secondary structure 












Query SS confidence 






















Query Sequence  FAETHFIAQACYPLTCIRQGYRS
Query Conservation        
 
   
   
  


 
Alig confidence 






















Template Conservation     
  

   
 
         
Template Sequence  FSRHDLIGQVVLDNLLELAEQPP
Template Known Secondary structure  SS





TTGGGSS
S
Template Predicted Secondary structure 








Template SS confidence 






















   390.........400.........410..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions