Return to main results Retrieve Phyre Job Id

Job DescriptionQ9VXH3
Confidence100.00%DateWed Feb 13 11:23:55 GMT 2013
Rank4Aligned Residues547
% Identity45%Templatec1djyB_
PDB info PDB header:lipid degradationChain: B: PDB Molecule:phosphoinositide-specific phospholipase c, PDBTitle: phosphoinositide-specific phospholipase c-delta1 from rat2 complexed with inositol-2,4,5-trisphosphate
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   176...180.........190.........200..... ....210.........220.........230.........240.........250....
Predicted Secondary structure 









.




















Query SS confidence 





























.
















































Query Sequence  AQVTIKDFKLFLAGVSCKMTTGKFMEHFTE. DVRRKHDLKFDDFSRLYQKLLLPNGFASVLSGSGVANFPYSEDQQVVRP
Query Conservation    
    
  
   
        
   
  .
      
   

  
   
  
 
                     

 
Alig confidence 





























.
































.......








Template Conservation 



  


 


 
 
 

   

 

   
 
  
 





  


 
  
 

  

   .......      

 
Template Sequence  NKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIETFYKMLTQRAEIDRAFEEA. . . . . . . AGSAETLSV
Template Known Secondary structure 



TT



T
SS
SS


T

.......TTSSS
Template Predicted Secondary structure 




















.......






Template SS confidence 















































































   158.160.........170.........180.........190.........200.........210.........220. ........230
 
   255....260.........270.........280.........290.........300.........310.........320.........330....
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  AELKQFLETEQRDVSASEISSAAIASFIRDFVQDVERDVQEPYLTFPEFVDFLFSKQNDLWNSKYDQVFMDMNLPLSSYW
Query Conservation       

  

                     
          
  


   
 
  
 
       
 


  


 
 
Alig confidence 











...















.















































Template Conservation 


  

  

 ...
    

    

 
 .
   
   

 

 


  



            
  

  


 
 
Template Sequence  ERLVTFLQHQQR. . . EEEAGPALALSLIERY. EPSETAKAQRQMTKDGFLMYLLSADGNAFSLAHRRVYQDMDQPLSHYL
Template Known Secondary structure  TS
...
SS
S.


TT
STTTBSB
GGGGS

S
TTS
GGG
Template Predicted Secondary structure 

...




.

































Template SS confidence 















































































   231........240.. .......250........ .260.........270.........280.........290.........300......
 
   335....340.........350.........360.........370.........380.........390.........400.........410....
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  IASSHNTYLTGDQFSSESSCEAYARALRMGCRCIELDCWNGPDNLPYIFHGHTITSKIKFMDVIKTIKDHAFTSSEYPVI
Query Conservation 
 






 
 
  
 

 
 
  

  











    
 
 

 
 

 
 
 


  
   

  
 

 
Alig confidence 















































































Template Conservation 
 






 
 

   

   
  

  







 


   



 

 
 
  
 
  
   
   

  
 



Template Sequence  VSSSHNTYLLEDQLTGPSSTEAYIRALCKGCRCLELDCWDGPNQEPIIYHGYTFTSKILFCDVLRAIRDYAFKASPYPVI
Template Known Secondary structure  SSTTBSS
SSS

B
TT



GGG



TTS



TTTS
SS
Template Predicted Secondary structure 








































Template SS confidence 















































































   307..310.........320.........330.........340.........350.........360.........370.........380......
 
   415....420.........430.........440.........450.........460.........470.........480.........490....
Predicted Secondary structure 














































Query SS confidence 















































































Query Sequence  LSIEQNCSLEQQRNMAQALIEVFGDMLLTQPCDRNEQHLPSPYQLRRKIILKHKKLPQFDDIANGISSTGSLGHRSSLGG
Query Conservation 



 


  

  

       
  
           



  

 




 


                        
Alig confidence 























































........................
Template Conservation 



 


  

  

       
  
           



  

 




 
  ........................
Template Sequence  LSLENHCSLEQQRVMARHLRAILGPILLDQPLDGVTTSLPSPEQLKGKILLKGKKL. . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 

TTSB

S

SS

SS


TTTTTT



........................
Template Predicted Secondary structure 






















........................
Template SS confidence 















































































   387..390.........400.........410.........420.........430.........440..
 
   495....500.........510.........520.........530.........540.........550.........560.........570....
Predicted Secondary structure 






























































Query SS confidence 















































































Query Sequence  AGGGAHGENDGENVRKVFKEGLLYFKDPVDKSWNLYQFVLTHQELIYSSEINESRNGNSEDDDFGLSSSCSLNSNMQQKQ
Query Conservation                      
 
  


   
      


   
 
  
          

                  
Template Conservation  ................................................................................
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  ................................................................................
Template Predicted Secondary structure  ................................................................................
Template SS confidence 















































































  
 
   575....580.........590.........600.........610.........620.........630.........640.........650....
Predicted Secondary structure 






















































Query SS confidence 















































































Query Sequence  KDTSANDELHFGENWFHGKLEGGRKEADDLLKKYKHFGDGTFLVRESATFVGDYSLSFWRRNRPNHCRIKLKHENGSIKY
Query Conservation        

 
  
 





  

  

  
        
 





 
  






     
 
 

 
         
Template Conservation  ................................................................................
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  ................................................................................
Template Predicted Secondary structure  ................................................................................
Template SS confidence 















































































  
 
   655....660.........670.........680.........690.........700.........710.........720.........730....
Predicted Secondary structure 

































































Query SS confidence 















































































Query Sequence  YLVENFVFDSLYSLIVYYRKNMLRSSEFSIILKEPVPQPKKHEDQEWFHPNTTKEQAEQGLYRLEIGSFLVRPSVQSINA
Query Conservation    
    
 

  

 

    
        
  




  
 
  
     

  

  
 
   



 
 
     
Template Conservation  ................................................................................
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  ................................................................................
Template Predicted Secondary structure  ................................................................................
Template SS confidence 















































































  
 
   735....740.........750.........760.........770.........780.........790.........800.........810....
Predicted Secondary structure 






































































Query SS confidence 















































































Query Sequence  FVISFTINRKIKHCRIMQEGRLYGIDTMNFESLVSLINYYTRNPLYRNVKLSHPVSQELLRQALAEAAQGDHSGGHDDNG
Query Conservation   
 


    

    
 
      

  
 

   
      
      

 
                         
Template Conservation  ................................................................................
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  ................................................................................
Template Predicted Secondary structure  ................................................................................
Template SS confidence 















































































  
 
   815....820.........830.........840.........850.........860.........870.........880.........890....
Predicted Secondary structure 

































































Query SS confidence 















































































Query Sequence  ASNYMGSNLEENVTCKALYSYKANKPDELSFPKHAIITNVQRDNSMWWIGDYGGMIKKHLPANYVKVIDSTTEDYNSLNE
Query Conservation                  

    
    



 

 

 
  

  


 
    



 

  


              
Template Conservation  ................................................................................
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  ................................................................................
Template Predicted Secondary structure  ................................................................................
Template SS confidence 















































































  
 
   895....900.........910.........920.........930.........940.........950.........960.........970....
Predicted Secondary structure 








































Query SS confidence 















































































Query Sequence  EGTDGRTDSIEIFGAVASLFESNDPGIIFKLQIQTPTMQNPFVIGFDNQETAYEWIKAIQEAALIASQLASERRKKERTA
Query Conservation                         
     
             
     
    
                         
Alig confidence  ..........................................................................





Template Conservation  ..........................................................................      
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GGLDKL
Template Known Secondary structure  ..........................................................................



TT
Template Predicted Secondary structure  ..........................................................................



Template SS confidence 















































































   443.....
 
   975....980.........990... ......1000.........1010.........1020.........1030.........1040........
Predicted Secondary structure 





......































Query SS confidence 


















. . . . . .






















































Query Sequence  RVAKEMSDLIIYFRSVPFR. . . . . . EHSWIFQEMSSFPETKAEKQFFQQNTQLFLSYHRNQISRVYPKGQRLDSSNFNPM
Query Conservation   
  




  
   
 
 ......          
  
     
            
   
 



 
 
 



  
 
Alig confidence 


















......




















.
































Template Conservation      


 
                          
 

       .          
   
 



 
 
  


  
 
Template Sequence  KLVPELSDMIIYCKSVHFGGFSSPGTSGQAFYEMASFSESRALRLL. QESGNGFVRHNVSCLSRIYPAGWRTDSSNYSPV
Template Known Secondary structure  T

TT

S






SSS
S

TT.S


TT
TT




Template Predicted Secondary structure 



























.















Template SS confidence 















































































   487..490.........500.........510.........520.........530.. .......540.........550.........560.....
 
   10491050.........1060.........1070.........1080.........1090..... ....1100.. .......1110.........1120....
Predicted Secondary structure 



















..






.










.
Query SS confidence 














































. .






.





















.
Query Sequence  PFWNVGSQMIALNYQTGDKAMQLNQAKFRNNGQCGYILKPSFMKSDS. . FNPNNPL. CDGLSEVKVSIRLIAARHLFRG.
Query Conservation    
  
 





 

 
  
 

   
  

  





  

   ..  
    .          
 


 
 

  .
Alig confidence 














































..






.





















.
Template Conservation    
  
 
 



 

 
  
 

 
 
  

  





  

                     
 
 




 

   
Template Sequence  EMWNGGCQIVALNFQTPGPEMDVYLGCFQDNGGCGYVLKPAFLRDPNTTFNSRALTQGPWWRPERLRVRIISGQQLPKVN
Template Known Secondary structure  TTT


TTS
STTSGGG
S

GGGS
TT



TTS

SSTT







S
Template Predicted Secondary structure 









































Template SS confidence 















































































   566...570.........580.........590.........600.........610.........620.........630.........640.....
 
   1125....1130.........1140.........1150.........1160.........1170.........1180.........1190.........1200.
Predicted Secondary structure  ...







































Query SS confidence  . . .












































































Query Sequence  . . . GKSNNPQIVVELIGASFDTGVKYRTKVNENGFNPVWNESCEFNVRNPQFAILRFEVQDEDMFAETHFIAQACYPLTC
Query Conservation  ...     
 
 


 
   
     
  
  

 

 
   
 
 
  



 


 
 
 
       
 
   
   
Alig confidence  ...












































































Template Conservation         



 
 
 
   
     
  
  

 

 
 
 
 
 
  



 


 
 
 
       


  


  
Template Sequence  KNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVEDYDSSSKNDFIGQSTIPWNS
Template Known Secondary structure 

SS



SSGGG




TT
SSS
S
GGG


TTS

GGG
Template Predicted Secondary structure 









































Template SS confidence 















































































   646...650.........660.........670.........680.........690.........700.........710.........720.....
 
   1202.......1210.........1220.........1230..
Predicted Secondary structure 














Query SS confidence 






























Query Sequence  IRQGYRSVILRNKFSEELELSSLLINIKIAN
Query Conservation 
  


 
 
       
  




 
 
  
Alig confidence 






























Template Conservation 

 


 


 
  
       
 
     
Template Sequence  LKQGYRHVHLLSKNGDQHPSATLFVKISIQD
Template Known Secondary structure  B


TTS

Template Predicted Secondary structure 















Template SS confidence 






























   726...730.........740.........750......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions