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Job DescriptionQ7KSQ2
Confidence100.00%DateTue Jan 22 11:45:00 GMT 2013
Rank306Aligned Residues219
% Identity14%Templatec4gygA_
PDB info PDB header:transferaseChain: A: PDB Molecule:rio2 kinase; PDBTitle: crystal structure of the rio2 kinase from chaetomium thermophilum
Resolution2.48 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   471........480.........490 .........500. ........510.........520.........530.....
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Query Sequence  LQLRESIGKGEFGDVMLGIL. RNEKVAVKMLK. . . . . . . . . . . . . . DEGAVQKFLAEASVMTTLEHDNLVKFIGLVFTSK
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Template Sequence  YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPVP
Template Known Secondary structure  S
SS
TT


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TTS
TT
S

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   96...100.........110.........120.........130.........140.........150.........160.........170.....
 
   536.. .540.........550.........560.........570.........580.........590.........600.........
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Query Sequence  HLY. . . . . . LVTEYMSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLISEDCVAKVSDFG
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Template Sequence  EPIAQSRHTIVMSLVDALPMRQ. . . . . . . . VSSVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSI
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TT

S
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S
TT
S


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TT
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   178.180.........190......... 200.........210.........220.........230.........240.........
 
   610.........620.........630.........640.........650.........660.........670.........680... .
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Query Sequence  LAREECYNLDVGKLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRIPLADVVKHVEVGYKMEAP. . . . . E
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Template Sequence  TLTPIIIDFPQMVSMDHPNAEMYFDR. . . . . . . DVQCIKRFFERRFH. FVSTTPGPFYKDAKKTVGKDGAKRLDAALEAS
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TT
TTSTT.......
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TT
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GGGTTGGG
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   250.........260.........270..... ....280......... 290.........300.........310.........320.
 
   685....690.........700.....
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Query Sequence  GCPPEIYEMMRQAWDLNPAKR
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Template Sequence  GFTKKMAKDLEAAIREQQESR
Template Known Secondary structure  T

TT
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   322.......330.........340..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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