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Job DescriptionQ7KSQ2
Confidence100.00%DateTue Jan 22 11:45:00 GMT 2013
Rank24Aligned Residues243
% Identity25%Templatec3soaA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase type ii subunit PDBTitle: full-length human camkii
Resolution3.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   468.470.........480.........490.........500. ........510.........520.........530.........540...
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Query Sequence  EAELQLRESIGKGEFGDVMLGILRNEKVAVKMLK. . . . DEGAVQKFLAEASVMTTLEHDNLVKFIGLVFTSKHLYLVTEY
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Template Sequence  TEEYQLFEELGKGSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDL
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TTTTS
S


BTTB


SS

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   10.........20.........30.........40.........50.........60.........70.........80.........
 
   544.....550.........560.........570.........580.........590.........600.. .......610... ....
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Query Sequence  MSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLISEDCV. . . AKVSDFGLARE. . . ECYN
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Template Sequence  VTGGELFEDIVAREY. . YSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQA
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B

B
S
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B



SSTTSBSSTT




SS
B


TT

B
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   92.......100...... ...110.........120.........130.........140.........150.........160.........
 
   618.620.........630.........640.........650.........660.........670....... ..680.........690....
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Query Sequence  LDVGKLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRIPLADVVKHVEVG. . . YKMEAPEGCPPEIYEMM
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Template Sequence  WFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLV. GYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLI
Template Known Secondary structure 


S
S
GGG

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   170.........180.........190.........200........ .210.........220.........230.........240........
 
   695....700.........710...
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Query Sequence  RQAWDLNPAKRPTFAELKV
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Template Sequence  NKMLTINPSKRITAAEALK
Template Known Secondary structure  S
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   249250.........260.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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