Job Description Q7KSQ2 Confidence 99.06% Date Tue Jan 22 11:45:00 GMT 2013 Rank 319 Aligned Residues 126 % Identity 17% Template c3ovcA_ PDB info PDB header:transferase/antibiotic Chain: A: PDB Molecule:hygromycin-b 4-o-kinase; PDBTitle: crystal structure of aminoglycoside phosphotransferase aph(4)-ia Resolution 1.95 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		474	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.			.	.	.	.	.	.	530	.	.	.	.	.		.	.	.	.	540	.	.	.	.	.	.	.	.	.	550
Predicted Secondary structure																																																				.	.													.
Query SS confidence																																																				.	.													.
Query Sequence		R	E	S	I	G	K	G	E	F	G	D	V	M	L	G	I	L	R	N	E	K	V	A	V	K	M	L	K	D	E	G	A	V	Q	K	F	L	A	E	A	S	V	M	T	T	L	E	H	D	N	.	.	L	V	K	F	I	G	L	V	F	T	S	K	.	H	L	Y	L	V	T	E	Y	M	S	K	G	S	L	V
Query Conservation																																																				.	.													.
Alig confidence																																.	.	.																		.	.													.
Template Conservation																																.	.	.
Template Sequence		L	X	Q	L	S	E	G	E	E	S	R	A	F	S	F	D	V	G	G	R	G	Y	V	L	R	V	N	S	C	A	.	.	.	D	G	F	Y	K	D	R	Y	V	Y	R	H	F	A	S	A	A	L	P	I	P	E	V	L	D	I	G	E	F	S	E	S	L	T	Y	C	I	S	R	R	A	Q	G	V	T	L	Q
Template Known Secondary structure									S	S									T	T									S			.	.	.																S	S	S											S	S	S	S											S			T	T
Template Predicted Secondary structure																																.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.				.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		551	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	Y	L	R	S	R	G	R	Q	H	I	T	K	K	D	Q	I	I	F	A	Y	D	T	A	S	G	M	E	Y	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.
Template Sequence		D	.	.	.	.	.	.	.	.	.	L	P	E	T	E	L	P	A	V	L	Q	P	V	A	E	A	X	D	A	I	A	A	A	D	L	S	Q	T	S	G	F	G	P	F	G	P	Q	G	I	G	Q	Y	T	T	W	R	D	F	I	C	A	I	A	D	P	H	V	Y	H	W	Q	T	V	X	D	D	T	V	S	A
Template Known Secondary structure		T	.	.	.	.	.	.	.	.	.	S		G	G	G	S	G	G	G																	T	T		B							T	T	S	B				S	S							G	G	G		T	T	T									T	T	T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.
Template SS confidence
		102										.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
																				582	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	K	V	V	H	R	D	L	A	A	R	N	V	L	I	S	E	D	C	V	A	K	V	S	D	F	G	L	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	V	A	Q	A	L	D	E	L	X	L	W	A	E	D	C	P	E	V	R	H	L	V	H	A	D	F	G	S	N	N	V	L	T	D	N	G	R	I	T	A	V	I	D	W	S	E	A
Template Known Secondary structure														G	G	G										S	S		S	S	T	T					T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions