Job Description Q7KSQ2 Confidence 94.87% Date Tue Jan 22 11:45:00 GMT 2013 Rank 434 Aligned Residues 80 % Identity 18% Template c3or8A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt6; PDBTitle: a tandem sh2 domain in transcription elongation factor spt6 Resolution 1.60 Å

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		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.		400	.	.	.	.	.	.								.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure																																																					.								.	.	.	.	.	.	.
Query SS confidence																																																					.								.	.	.	.	.	.	.
Query Sequence		K	L	N	A	M	P	W	F	H	G	S	I	T	R	D	E	A	E	H	L	L	Q	P	R	E	D	G	L	F	L	V	R	E	S	T	N	F	P	G	D	Y	T	L	C	V	C	F	Q	S	K	V	.	E	H	Y	R	V	K	Y	.	.	.	.	.	.	.	L	E	N	K	L	T	I	D	D	E	E	Y	F	E
Query Conservation																																																					.								.	.	.	.	.	.	.
Alig confidence											.																																										.								.	.	.	.	.	.	.
Template Conservation											.
Template Sequence		R	V	I	N	H	P	Y	Y	F	.	P	F	N	G	K	Q	A	E	D	Y	L	R	S	K	E	R	G	D	F	V	I	R	Q	S	S	R	G	D	D	H	L	A	I	T	W	K	L	D	K	D	L	F	Q	H	V	D	I	Q	E	L	E	K	E	N	P	L	A	L	G	K	V	L	V	V	E	G	Q	R	Y	H
Template Known Secondary structure							T	T			.												T	T	S		T	T								S	S		T	T										T	T											S		S	S	T	T	S			S					T	T				S
Template Predicted Secondary structure											.
Template SS confidence
		2	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		421	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	G	Q	L	V	A	H	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	D	Q	I	I	V	E	Y
Template Known Secondary structure		S								T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions