Return to main results Retrieve Phyre Job Id

Job DescriptionQ7KSQ2
Confidence100.00%DateTue Jan 22 11:45:00 GMT 2013
Rank49Aligned Residues246
% Identity25%Templatec3lijA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium/calmodulin dependent protein kinase with PDBTitle: crystal structure of full length cpcdpk3 (cgd5_820) in2 complex with ca2+ and amppnp
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   469470.........480.........490. ........500.........510.........520.........530.........540......
Predicted Secondary structure 



..















Query SS confidence 






















. .






















































Query Sequence  AELQLRESIGKGEFGDVMLGILR. . NEKVAVKMLKDEGAVQKFLAEASVMTTLEHDNLVKFIGLVFTSKHLYLVTEYMSK
Query Conservation          

 
  
 
      ..    
 
             
      
 
  

              
 
    
Alig confidence 












...






..













.







































Template Conservation    
     

 
 ...
            


 
     .     

 

  
 




 
           



    
Template Sequence  EMYQRVKKLGSGE. . . VLLCRDKVTHVERAIKIIRKSSN. SKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKG
Template Known Secondary structure 

...TTT



TT.TT


TTB


SS


S
Template Predicted Secondary structure 

...




.










Template SS confidence 















































































   60.........70.. .......80.........90..... ....100.........110.........120.........130.....
 
   547..550.........560.........570.........580.........590....... ..600.........610.. .......620.
Predicted Secondary structure 

















...










..








Query SS confidence 


















































. . .














. .








Query Sequence  GSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLI. . . SEDCVAKVSDFGLAR. . EECYNLDVG
Query Conservation 
 
   
                       
  

   
 
 


  


 ...      

 


   ..         
Alig confidence 











..




































...














..








Template Conservation 
 
         ..           

   
  

     
      

           
  


              
Template Sequence  GELFDEIIHRMK. . FNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKER
Template Known Secondary structure 
BSS..

TT
S

SGGGS
SSTT




TT

BTTB
B


Template Predicted Secondary structure 




..




































Template SS confidence 















































































   144.....150..... ....160.........170.........180.........190.........200.........210.........220.
 
   622.......630.........640.........650.........660.........670........ .680.........690........
Predicted Secondary structure 





















...








Query SS confidence 
























































. . .



















Query Sequence  KLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRIPLADVVKHVEVGY. . . KMEAPEGCPPEIYEMMRQAW
Query Conservation       
 


           
  
 
    
    
  
                 ...                    
Alig confidence 













.



















.




















...



















Template Conservation    
  
 


    .     






 




  .
  

       
   
               
     

   
Template Sequence  LGTAYYIAPEVLRK. KYDEKCDVWSIGVILFILLA. GYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQML
Template Known Secondary structure 
S
TTT

TT.
B
T.SS
SS

SST




SGGGTTS
T
Template Predicted Secondary structure 







.








.






















Template SS confidence 















































































   222.......230..... ....240.........250..... ....260.........270.........280.........290.........
 
   699700.........710.........720..
Predicted Secondary structure 





Query SS confidence 























Query Sequence  DLNPAKRPTFAELKVKLQLLNNAT
Query Conservation     
  

        
       
Alig confidence 























Template Conservation    

  
 
  
 
 
        
Template Sequence  QFDSQRRISAQQALEHPWIKEMCS
Template Known Secondary structure 
SSTTTS

T
Template Predicted Secondary structure 








Template SS confidence 























   300.........310.........320...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions