Job Description Q7KSQ2 Confidence 100.00% Date Tue Jan 22 11:45:00 GMT 2013 Rank 192 Aligned Residues 255 % Identity 34% Template c3kexA_ PDB info PDB header:transferase Chain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-3; PDBTitle: crystal structure of the catalytically inactive kinase2 domain of the human epidermal growth factor receptor 33 (her3) Resolution 2.80 Å

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		465	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.							.	.	.	.	.	.	500	.				.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.									.	.	.
Query SS confidence																															.	.	.	.	.	.									.	.	.
Query Sequence		V	I	P	E	A	E	L	Q	L	R	E	S	I	G	K	G	E	F	G	D	V	M	L	G	I	L	R	N	E	.	.	.	.	.	.	K	V	A	V	K	M	L	K	.	.	.	D	E	G	A	V	Q	K	F	L	A	E	A	S	V	M	T	T	L	E	H	D	N	L	V	K	F	I	G	L	V	F	T	S	K
Query Conservation																															.	.	.	.	.	.									.	.	.
Alig confidence																															.	.	.	.	.	.									.	.	.
Template Conservation
Template Sequence		I	F	K	E	T	E	L	R	K	L	K	V	L	G	S	G	V	F	G	T	V	H	K	G	V	W	I	P	E	G	E	S	I	K	I	P	V	C	I	K	V	I	E	D	K	S	G	R	Q	S	F	Q	A	V	T	D	H	M	L	A	I	G	S	L	D	H	A	H	I	V	R	L	L	G	L	C	P	G	S	S
Template Known Secondary structure		B			T	T	T											S	S											T	T		S													T	T	S		S		B		S										T				T	T	B									B	S	S
Template Predicted Secondary structure
Template SS confidence
		684	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.
		536	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	Y	L	V	T	E	Y	M	S	K	G	S	L	V	D	Y	L	R	S	R	G	R	Q	H	I	T	K	K	D	Q	I	I	F	A	Y	D	T	A	S	G	M	E	Y	L	E	A	K	K	V	V	H	R	D	L	A	A	R	N	V	L	I	S	E	D	C	V	A	K	V	S	D	F	G	L	A	R	E	E	C
Query Conservation
Alig confidence			.																							.
Template Conservation			.																							.
Template Sequence		L	.	Q	L	V	T	Q	Y	L	P	L	G	S	L	L	D	H	V	R	Q	H	R	G	A	.	L	G	P	Q	L	L	L	N	W	G	V	Q	I	A	K	G	M	Y	Y	L	E	E	H	G	M	V	H	R	N	L	A	A	R	N	V	L	L	K	S	P	S	Q	V	Q	V	A	D	F	G	V	A	D	L	L	P
Template Known Secondary structure			.								T	T		B	S						S	S	G	G	G	.	S		T	T																			T	T				S			S	S	T	T				S	S	S	S						S		S	G	G	G	G	S
Template Predicted Secondary structure			.																							.
Template SS confidence
		764		.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.		.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.
		616	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	N	L	D	V	G	K	L	P	I	K	W	T	A	P	E	A	L	K	N	G	R	F	S	N	K	S	D	M	W	S	F	G	I	L	L	W	E	I	Y	S	F	G	R	V	P	Y	P	R	I	P	L	A	D	V	V	K	H	V	E	V	G	Y	K	M	E	A	P	E	G	C	P	P	E	I	Y	E	M	M	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	D	D	K	Q	L	L	T	P	I	K	W	M	A	L	E	S	I	H	F	G	K	Y	T	H	Q	S	D	V	W	S	Y	G	V	T	V	W	E	L	M	T	F	G	A	E	P	Y	A	G	L	R	L	A	E	V	P	D	L	L	E	K	G	E	R	L	A	Q	P	Q	I	C	T	I	D	V	Y	M	V	M	V
Template Known Secondary structure				T	T						T	T	T	S																												T	T	S			T	T	T	T	S		T	T								T	T							T	T	B		T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		842	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.
		696	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	W	D	L	N	P	A	K	R	P	T	F	A	E	L	K	V	K	L	Q	L	L	N	N	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	C	W	M	I	D	E	N	I	R	P	T	F	K	E	L	A	N	E	F	T	R	M	A	R	D
Template Known Secondary structure				T		S		T	T	T	S														T	T	S
Template Predicted Secondary structure
Template SS confidence
		927	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions