Job Description Q7KSQ2 Confidence 100.00% Date Tue Jan 22 11:45:00 GMT 2013 Rank 283 Aligned Residues 233 % Identity 24% Template c3gc0A_ PDB info PDB header:transferase Chain: A: PDB Molecule:kinase, cmgc cdk; PDBTitle: structure of the cmgc cdk kinase from giardia lamblia in complex with2 amp Resolution 2.00 Å

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		468	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.			.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		E	A	E	L	Q	L	R	E	S	I	G	K	G	E	F	G	D	V	M	L	G	I	L	R	.	.	N	E	K	V	A	V	K	M	L	K	D	E	G	A	V	Q	K	F	L	A	E	A	S	V	M	T	T	L	E	H	D	N	L	V	K	F	I	G	L	V	F	T	S	K	H	L	Y	L	V	T	E	Y	M	S
Query Conservation																										.	.
Alig confidence																										.	.														.	.	.
Template Conservation																																									.	.	.
Template Sequence		I	D	R	Y	R	R	I	T	K	L	G	E	G	T	Y	G	E	V	Y	K	A	I	D	T	V	T	N	E	T	V	A	I	K	R	I	R	L	E	H	.	.	.	T	A	I	R	E	V	S	L	L	K	E	L	Q	H	R	N	I	I	E	L	K	S	V	I	H	H	N	H	R	L	H	L	I	F	E	Y	A	E
Template Known Secondary structure		G	G	G											S	S	S								T	T	T	T													.	.	.									G	G	G			B	T	T	B										T	T										S
Template Predicted Secondary structure																																									.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50				.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		546	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.		.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		K	G	S	L	V	D	Y	L	R	S	R	G	R	Q	H	I	T	K	K	D	Q	I	I	F	A	Y	D	T	A	S	G	M	E	Y	L	E	A	K	K	V	V	H	R	D	L	A	A	R	N	V	L	.	I	S	E	D	C	V	A	K	V	S	D	F	G	L	A	R	E	E	C	Y	N	L	D	V	G	K	L	P
Query Conservation																																																					.
Alig confidence														.	.	.																																					.																				.	.	.	.	.	.
Template Conservation														.	.	.																																																									.	.	.	.	.	.
Template Sequence		N	D	L	K	K	Y	M	D	K	N	P	D	.	.	.	V	S	M	R	V	I	K	S	F	L	Y	Q	L	I	N	G	V	N	F	C	H	S	R	R	C	L	H	R	D	L	K	P	Q	N	L	L	L	S	V	E	T	P	V	L	K	I	G	D	F	G	L	A	R	A	F	E	.	.	.	.	.	.	I	I	T
Template Known Secondary structure												T	T	.	.	.																							T	T				S				G	G	G															T	T							.	.	.	.	.	.	G	G	G
Template Predicted Secondary structure														.	.	.																																																									.	.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.				.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.							.	.	.
		625	.	.	.	.	630	.	.	.	.	.	.	.		.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.
Predicted Secondary structure															.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	K	W	T	A	P	E	A	L	K	N	G	R	.	F	S	N	K	S	D	M	W	S	F	G	I	L	L	W	E	I	Y	S	F	G	R	V	P	Y	P	R	I	P	L	A	D	V	V	K	H	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation															.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.																				.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.
Template Sequence		L	W	Y	R	P	P	E	I	L	L	G	S	R	H	Y	S	T	S	V	D	I	W	S	I	A	C	I	W	A	E	M	L	M	.	K	T	P	L	F	P	G	D	S	E	I	D	Q	L	F	K	I	F	E	V	L	G	L	P	D	D	T	T	W	P	G	V	T	A	L	P	D	W	K	Q	S	F	P	K	F	R
Template Known Secondary structure		G	G	G							T	T		S				T																	.	S	S		S	S			S	S																	T	T	T	S	T	T	G	G	G	S	T	T			T	T	S
Template Predicted Secondary structure																																			.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
			676	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	V	G	Y	K	M	E	A	P	E	G	C	P	P	E	I	Y	E	M	M	R	Q	A	W	D	L	N	P	A	K	R	P	T	F	A	E	L	K	V
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		G	K	T	L	K	R	V	L	G	A	L	L	D	D	E	G	L	D	L	L	T	A	M	L	E	M	D	P	V	K	R	I	S	A	K	N	A	L	E
Template Known Secondary structure										G	G	G	S												T		S	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions