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Job DescriptionQ7KSQ2
Confidence100.00%DateTue Jan 22 11:45:00 GMT 2013
Rank182Aligned Residues240
% Identity27%Templatec3dxnA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calmodulin-like domain protein kinase isoform 3; PDBTitle: crystal structure of the calcium-dependent kinase from toxoplasma2 gondii, 541.m00134, kinase domain.
Resolution2.17 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   469470.........480.........490. ........500. ........510.........520.........530.........540..
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Query Sequence  AELQLRESIGKGEFGDVMLGILR. NEKVAVKMLK. . . . . DEGAVQKFLAEASVMTTLEHDNLVKFIGLVFTSKHLYLVTE
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Template Sequence  DRYQR. . VKKLGSYGEVLLCKDKTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVME
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GGGS


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   21.... ....30.........40.........50.........60.........70.........80.........90........
 
   543......550.........560.........570.........580.........590.........600 .........610.........620
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Query Sequence  YMSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLISED. . CVAKVSDFGLAREECYNLDV
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Template Sequence  VYRGGELFDEIILRQK. . FSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSDALIKIVDFGLS. . . . . AHFE
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BSS..

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STT
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   102.......110....... ..120.........130.........140.........150.........160.........170 ....
 
   621........630.........640.........650.........660.........670........ .680.........690.......
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Query Sequence  GKLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRIPLADVVKHVEVGY. . . KMEAPEGCPPEIYEMMRQA
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Template Sequence  RLGTAYYIAPEVLR. KKYDEKCDVWSCGVILYILLC. GYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLM
Template Known Secondary structure  TTT
TTT

T.T


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   183......190...... ...200.........210....... ..220.........230.........240.........250.........260
 
   698.700.........710.........
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Query Sequence  WDLNPAKRPTFAELKVKLQLLN
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Template Sequence  LTYEPSKRISAEEALNHPWIVK
Template Known Secondary structure  T
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TTTS

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   261........270.........280..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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