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Job DescriptionQ7KSQ2
Confidence100.00%DateTue Jan 22 11:45:00 GMT 2013
Rank214Aligned Residues218
% Identity27%Templatec3db8A_
PDB info PDB header:transferaseChain: A: PDB Molecule:polo-like kinase 1; PDBTitle: crystal structure of an activated (thr->asp) polo-like2 kinase 1 (plk1) catalytic domain in complex with compound3 041
Resolution3.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   469470.........480.........490. ........500. ........510.........520.........530.........540.
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Query Sequence  AELQLRESIGKGEFGDVMLGILR. . NEKVAVKMLK. . . . . DEGAVQKFLAEASVMTTLEHDNLVKFIGLVFTSKHLYLVT
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Template Sequence  KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVL
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   37..40.........50.........60.........70.........80.........90.........100.........110......
 
   542.......550.........560.........570.........580.........590.........600.........610.........620.
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Query Sequence  EYMSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLISEDCVAKVSDFGLAREECYNLDVG
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Template Sequence  EICRRRSLLELHKRRKA. . VTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI. . . . . . .
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   117..120.........130... ......140.........150.........160.........170.........180.......
 
   622.......630.........640.........650.........660.........670.........680.........690.........700.
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Query Sequence  KLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRIPLADVVKHVEVGYKMEAPEGCPPEIYEMMRQAWDLN
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Template Sequence  . . . . . . . . . . . . . . . . HSFEVDIWSLGCILYTLLV. GKPPFETSCLKETYIRIKKNE. YSVPRHINPVASALIRRMLHAD
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   214.....220.........230.. .......240.........250... ......260.........270.....
 
   702.......710...
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Query Sequence  PAKRPTFAELKV
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Template Sequence  PTLRPSVAELLT
Template Known Secondary structure  GGGS

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   276...280.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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