Job Description Q7KSQ2 Confidence 90.61% Date Tue Jan 22 11:45:00 GMT 2013 Rank 440 Aligned Residues 115 % Identity 21% Template c2x6kB_ PDB info PDB header:transferase Chain: B: PDB Molecule:phosphotidylinositol 3 kinase 59f; PDBTitle: the crystal structure of the drosophila class iii pi3-kinase2 vps34 in complex with pi-103 Resolution 3.50 Å

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		494	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.					520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	V	A	V	K	M	L	K	D	E	G	A	V	Q	K	F	L	A	E	A	S	V	M	T	T	L	.	.	.	.	E	H	D	N	L	V	K	F	I	G	L	V	F	T	S	K	H	L	Y	L	V	T	E	Y	M	S	K	G	S	L	V	D	Y	L	R	S	R	G	R	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																												.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.																						.																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.
Template Sequence		A	A	I	F	K	H	G	D	D	L	R	Q	D	Q	L	I	L	Q	M	I	T	L	M	D	K	L	L	R	R	E	N	L	D	L	K	L	T	P	Y	K	V	L	A	T	S	S	K	H	G	F	L	.	Q	Y	V	D	S	C	T	V	A	E	V	L	A	R	E	G	N	I	H	N	F	F	R	K	H	H	P	C
Template Known Secondary structure								S	S																						T	T															T	T					.															S	S	S
Template Predicted Secondary structure																																																					.
Template SS confidence
		694	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.		.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.
						559	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	Q	H	I	T	K	K	D	Q	I	I	F	A	Y	D	T	A	S	G	M	E	Y	L	E	A	K	K	V	V	H	R	D	L	A	A	R	N	V	L	I	S	E	D	C	V	A	K	V	S	D	F	G	L	A
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.																												.	.
Template Conservation																																	.	.
Template Sequence		D	N	G	P	Y	G	I	S	A	E	V	M	D	T	Y	I	K	S	C	A	G	Y	C	V	I	T	Y	L	L	G	V	.	.	G	D	R	H	L	D	N	L	L	L	T	T	N	G	K	L	F	H	I	D	F	G	Y	I
Template Known Secondary structure		S	S	S	S	S	S	S																							T		.	.	B				T	T	T					T	T									S	B
Template Predicted Secondary structure																																	.	.
Template SS confidence
		773	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.			.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions