277 c2vagA_ Probab=100.00  E-value=1.5e-40  Score=254.03  Aligned_columns=250  Identities=22%

Q ss_pred             CCCEECHHHEEEEEEEEECCCEEEEEEEEC---CEEEEEEEEC-CCCHHHHHHHHHHHHHHCCCCCE------EEEEEEE
Q ss_conf             660306887678866742398069999997---9089999983-83027999999999986599857------4588718
Q batch____       462 KGWVIPEAELQLRESIGKGEFGDVMLGILR---NEKVAVKMLK-DEGAVQKFLAEASVMTTLEHDNL------VKFIGLV  531 (723)
Q Consensus       462 ~~~~i~~~~~~~~~~ig~G~~g~v~~~~~~---~~~~a~k~~~-~~~~~~~~~~e~~~~~~l~h~~i------v~~~~~~  531 (723)
                      +..++-.++|+++++||+|+||.||+|+++   ++.||||+++ ++.....+.+|+.+|++|+|+||      +.+.+.+
T Consensus         6 ~~g~~l~~~Y~i~~~LG~G~fG~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~Ei~il~~l~h~~~~~~~~~~~~~~~~   85 (330)
T c2vagA_           6 QSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWF   85 (330)
T ss_dssp             CTTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEE
T ss_pred             ECCCEECCCEEEEEEEEECCCEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCC
T ss_conf             25848678259999987628848999999767983999999839905689999999999984312223312220000123


Q ss_pred             EECCEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCEEEECCCCCC
Q ss_conf             78896899997899875999999628888889999999999999999999759210558988788878985998522142
Q batch____       532 FTSKHLYLVTEYMSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLISEDCVAKVSDFGLA  611 (723)
Q Consensus       532 ~~~~~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~i~H~dlk~~nil~~~~~~~kl~dfg~~  611 (723)
                      .....++++++++ .+++...........+.......++.+++.+|.++|..+++|+|+||+|||++.++..++.||+.+
T Consensus        86 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~nil~~~~~~~~~~~~~~~  164 (330)
T c2vagA_          86 EHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNKRDE  164 (330)
T ss_dssp             EETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEECCCEE
T ss_pred             CCCCEECCCCCCC-CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEECCCCCC
T ss_conf             3320000122112-367521112221110136565555544555554311012222345541589857886200034543


Q ss_pred             C--------------CCCCCCCCCCCCHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH-
Q ss_conf             0--------------2445543111486778977984799863789999999999999388988988899999999980-
Q batch____       612 R--------------EECYNLDVGKLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRIPLADVVKHVEV-  676 (723)
Q Consensus       612 ~--------------~~~~~~~~~~~~~~y~ape~~~~~~~~~~~D~~s~g~~~~e~~~~g~~p~~~~~~~~~~~~~~~-  676 (723)
                      .              ...........+..|.+||......+..+.|+|++||++|++.+ ++.|+...+..+.+..+.. 
T Consensus       165 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~  243 (330)
T c2vagA_         165 RTLINPDIKVVDFGSATYDDEHHSTLVRHYRAPEVILALGWSQPCDVWSIGCILIEYYL-GFTVFPTHDSKEHLAMMERI  243 (330)
T ss_dssp             EEESCCCEEECCCSSCEETTSCCCSCCCCSCCHHHHTTSCCSTHHHHHHHHHHHHHHHH-SSCSCCCSCHHHHHHHHHHH
T ss_pred             CCCCCCCCEEECCCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCCCCEEEEEEECCCC-CCCCCCCCCHHHHHHHHHHH
T ss_conf             34444321000146633267542001210232100000111123542102258731004-88988758968999999851


Q ss_pred             ------------------------------------------CCCCCCCCCCCHHHHHHHHHHHCCCHHHCCCHHHHHH
Q ss_conf             ------------------------------------------8888888778999999999970569778699999999
Q batch____       677 ------------------------------------------GYKMEAPEGCPPEIYEMMRQAWDLNPAKRPTFAELKV  713 (723)
Q Consensus       677 ------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~p~~Rp~~~~~~~  713 (723)
                                                                .........+++++.+||++||..||++|||+.||.+
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~elL~  322 (330)
T c2vagA_         244 LGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALK  322 (330)
T ss_dssp             HCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             CCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf             3889988974420121235465665321000111001233310023565458999999999866588111776789967


