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Job DescriptionQ9VGK8
Confidence100.00%DateWed Feb 13 11:19:23 GMT 2013
Rank229Aligned Residues245
% Identity22%Templatec4fr4B_
PDB info PDB header:transferaseChain: B: PDB Molecule:serine/threonine-protein kinase 32a; PDBTitle: crystal structure of human serine/threonine-protein kinase 32a (yank1)
Resolution2.29 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   547..550.........560.........570... ......580... ......590.........600.........610.........
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Query Sequence  VIPEAELQLRESIGKGEFGDVMLGILR. . NEKVAVKMLK. . . . . DEGAVQKFLAEASVMTTLEHDNLVKFIGLVFTSKHL
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Template Sequence  DVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDM
Template Known Secondary structure 


GGG

SS

TTT

TT
T


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   17..20.........30.........40.........50.........60.........70.........80.........90......
 
   620.........630.........640.........650.........660.........670.........680.........690.........
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Query Sequence  YLVTEYMSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLISEDCVAKVSDFGLAREECYN
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Template Sequence  FMVVDLLLGGDLRYHLQQNVH. . FKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE
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SGGG
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   97..100.........110....... ..120.........130.........140.........150.........160.........170....
 
   700 .........710....... ..720.........730.........740.........750........ .760.........770..
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Query Sequence  L. . DVGKLPIKWTAPEALKN. . . GRFSNKSDMWSFGILLWEIYSFGRVPYPRIPLADVVKHVEV. . GYKMEAPEGCPPEI
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Template Sequence  TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLR. GRRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQEM
Template Known Secondary structure 

B



S
GGG

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B
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   175....180.........190.........200.........210........ .220.........230.........240.........250...
 
   773......780......... 790....
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Query Sequence  YEMMRQAWDLNPAKRPT. FAELK
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Template Sequence  VSLLKKLLEPNPDQRFSQLSDVQ
Template Known Secondary structure  S
SSTTTS

S
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   254.....260.........270......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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